| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_033379m |
| Family | CE8 |
| Protein Properties | Length: 372 Molecular Weight: 41235.7 Isoelectric Point: 7.7993 |
| Chromosome | Chromosome/Scaffold: 03332 Start: 442016 End: 444005 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 73 | 365 | 0 |
| IVVDKNGGGDSLTVQGAIDMVPEHNTGRVKIYILPGIYREKVVVPSIKPYISFIGKEGRIYDTIITWNSKASDTDSNGAELGTYRSASITIESDYFCATG ITFENTVVAVPGGYGMQAVALRVSGDKAFFFKVRILGTQDTLLDETGSHYFYQCHIQGSVDFIFGRGRSLFQDCVLQSTATKTGAIAAHHRDSPYDDTGF SFVGCVINGTGKILLGRAWGNYSRAIYSYSYFDNIIIPSGWSDWNNPYRQKTVVFGEYECSGRGADTRGRVPWLKTFTYVEVKPFLGMQFING | |||
| Full Sequence |
|---|
| Protein Sequence Length: 372 Download |
| MLIIVDRGGK TMERSVLSAF VVVFMSFLGC FQVGLSQSEV YVKDFITWDD MKVDDSGRAR 60 LSSRDNYNGS RVIVVDKNGG GDSLTVQGAI DMVPEHNTGR VKIYILPGIY REKVVVPSIK 120 PYISFIGKEG RIYDTIITWN SKASDTDSNG AELGTYRSAS ITIESDYFCA TGITFENTVV 180 AVPGGYGMQA VALRVSGDKA FFFKVRILGT QDTLLDETGS HYFYQCHIQG SVDFIFGRGR 240 SLFQDCVLQS TATKTGAIAA HHRDSPYDDT GFSFVGCVIN GTGKILLGRA WGNYSRAIYS 300 YSYFDNIIIP SGWSDWNNPY RQKTVVFGEY ECSGRGADTR GRVPWLKTFT YVEVKPFLGM 360 QFINGGQWLR L* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02665 | PLN02665 | 2.0e-101 | 71 | 369 | 302 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 6.0e-102 | 72 | 370 | 299 | + putative pectinesterase | ||
| PLN02634 | PLN02634 | 8.0e-113 | 69 | 369 | 303 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 2.0e-123 | 70 | 371 | 304 | + pectinesterase family protein | ||
| PLN02671 | PLN02671 | 0 | 10 | 371 | 363 | + pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EEE67559.1 | 0 | 45 | 371 | 33 | 398 | hypothetical protein OsJ_25062 [Oryza sativa Japonica Group] |
| RefSeq | NP_200370.1 | 0 | 42 | 371 | 35 | 380 | QRT1 (QUARTET 1); pectinesterase [Arabidopsis thaliana] |
| RefSeq | XP_002264297.1 | 0 | 45 | 371 | 34 | 359 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298857.1 | 0 | 59 | 371 | 6 | 318 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002522727.1 | 0 | 1 | 371 | 13 | 383 | Pectinesterase U1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 73 | 370 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 2e-38 | 74 | 370 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 0.00000000000009 | 85 | 250 | 20 | 192 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 0.00000000000009 | 85 | 250 | 20 | 192 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 0.00000000000009 | 85 | 250 | 20 | 192 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
