| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_033706m |
| Family | GT5 |
| Protein Properties | Length: 183 Molecular Weight: 20202.8 Isoelectric Point: 5.6289 |
| Chromosome | Chromosome/Scaffold: 09335 Start: 71334 End: 73051 |
| Description | starch synthase 4 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 16 | 166 | 6.2e-22 |
| LKAVVWNATGNSVQFIFMGSKIPSANRSLESLQKELQGENVRFINKYDEAVSHLIFAGSDIILCQSFHDPLLQVPLKALKYGAAPVALASNDNRFRSVAD HEQEATKFTQLISSTFGNMSLSEALNEINNNPSKWRRSIINSMAMDFSWNA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 183 Download |
| VGCIFSEMSD SDADKLKAVV WNATGNSVQF IFMGSKIPSA NRSLESLQKE LQGENVRFIN 60 KYDEAVSHLI FAGSDIILCQ SFHDPLLQVP LKALKYGAAP VALASNDNRF RSVADHEQEA 120 TKFTQLISST FGNMSLSEAL NEINNNPSKW RRSIINSMAM DFSWNAECYD IHVSAYTALK 180 SL* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0297 | GlgA | 5.0e-14 | 14 | 169 | 168 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 5.0e-15 | 26 | 169 | 162 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-16 | 16 | 169 | 185 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| PLN02939 | PLN02939 | 2.0e-17 | 29 | 164 | 148 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 8.0e-20 | 13 | 179 | 181 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACD13789.1 | 0 | 1 | 182 | 500 | 682 | starch synthase V precursor [Vitis vinifera] |
| EMBL | CBI18615.1 | 0 | 1 | 182 | 587 | 769 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002262708.1 | 0 | 1 | 182 | 148 | 330 | PREDICTED: starch synthase V, partial [Vitis vinifera] |
| RefSeq | XP_002310316.1 | 0 | 1 | 182 | 489 | 669 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528907.1 | 0 | 1 | 172 | 508 | 680 | starch synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0.0000007 | 29 | 165 | 323 | 463 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0.000001 | 29 | 165 | 323 | 463 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0.000001 | 29 | 165 | 323 | 463 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0.000001 | 29 | 165 | 323 | 463 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0.000001 | 29 | 165 | 323 | 463 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV140721 | 183 | 1 | 183 | 0 |
| CX172965 | 183 | 1 | 183 | 0 |
| CK096459 | 174 | 10 | 183 | 0 |
| CB919961 | 184 | 1 | 183 | 0 |
| DV455772 | 116 | 1 | 116 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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