| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_034006m |
| Family | GH14 |
| Protein Properties | Length: 301 Molecular Weight: 33717.8 Isoelectric Point: 8.4334 |
| Chromosome | Chromosome/Scaffold: 07069 Start: 47889 End: 49019 |
| Description | chloroplast beta-amylase |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 1 | 255 | 0 |
| EIQVGMGPCGELRYPAYPESNGTWRFPGIGEFQCYDKYMKASLEAAAEAIGKRDWGRGGPHDAGHYNQFPEETGFFQRGGTWNTDYGQFFLEWYSGKLLD HGDRILAAAKGIFQGSGAKLSGKVAGIHWHYRTRSHAAELTAGYYNTRHHDGYLPVARMFSKQGVVFNFTCMEMRDQEQPESANCSPEGLVRQVKMVTRT AGIELAGENALERYDAGAYAQVLATSRSESGNQLAAFTYLRMNKKLFERSNWRHL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 301 Download |
| EIQVGMGPCG ELRYPAYPES NGTWRFPGIG EFQCYDKYMK ASLEAAAEAI GKRDWGRGGP 60 HDAGHYNQFP EETGFFQRGG TWNTDYGQFF LEWYSGKLLD HGDRILAAAK GIFQGSGAKL 120 SGKVAGIHWH YRTRSHAAEL TAGYYNTRHH DGYLPVARMF SKQGVVFNFT CMEMRDQEQP 180 ESANCSPEGL VRQVKMVTRT AGIELAGENA LERYDAGAYA QVLATSRSES GNQLAAFTYL 240 RMNKKLFERS NWRHLVEFVK SMSEQGQNKR LAECDSRGTD LYVGFIKDKN VKRTKEAALA 300 * 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02161 | PLN02161 | 3.0e-93 | 1 | 263 | 270 | + beta-amylase | ||
| pfam01373 | Glyco_hydro_14 | 3.0e-96 | 1 | 258 | 271 | + Glycosyl hydrolase family 14. This family are beta amylases. | ||
| PLN02801 | PLN02801 | 8.0e-110 | 1 | 262 | 269 | + beta-amylase | ||
| PLN00197 | PLN00197 | 8.0e-137 | 1 | 300 | 308 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 0 | 1 | 300 | 300 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62440.1 | 0 | 1 | 300 | 244 | 543 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002282871.1 | 0 | 1 | 300 | 244 | 543 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326690.1 | 0 | 1 | 300 | 248 | 547 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329547.1 | 0 | 1 | 300 | 249 | 548 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517513.1 | 0 | 1 | 299 | 248 | 546 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2dqx_A | 0 | 1 | 262 | 176 | 441 | A Chain A, Mutant Beta-Amylase (W55r) From Soy Bean |
| PDB | 1q6d_A | 0 | 1 | 262 | 176 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1wdp_A | 0 | 1 | 262 | 176 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1q6c_A | 0 | 1 | 262 | 176 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| PDB | 1bfn_A | 0 | 1 | 262 | 176 | 441 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Complexed With Maltose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EB681845 | 293 | 1 | 293 | 0 |
| FE677692 | 281 | 5 | 285 | 0 |
| HO794833 | 292 | 1 | 292 | 0 |
| FE677690 | 277 | 10 | 286 | 0 |
| DV138264 | 240 | 1 | 240 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
