| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_034020m |
| Family | GH35 |
| Protein Properties | Length: 447 Molecular Weight: 49849.4 Isoelectric Point: 6.0568 |
| Chromosome | Chromosome/Scaffold: 12525 Start: 562380 End: 566757 |
| Description | beta-galactosidase 17 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 10 | 125 | 1.3e-31 |
| SPIFKLQKEFNAPGKSPPLSAEFYTGWLTHWGEDLQHTGAGFTASALEKIFSQNGSAVLYMAHGGTNFGFYNGANTIADESGYTYKPDITSYDYDAPIKE SGDVDNAKFRALKRVI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 447 Download |
| VDFSTGEDPS PIFKLQKEFN APGKSPPLSA EFYTGWLTHW GEDLQHTGAG FTASALEKIF 60 SQNGSAVLYM AHGGTNFGFY NGANTIADES GYTYKPDITS YDYDAPIKES GDVDNAKFRA 120 LKRVIGRHSV ASLPSTPPDN EKTGYGPIRL QKTAFLFDLL DMINPADVVE SRNPVSMESV 180 GQMFGFLVYV SEYASKDDGN ILFIPKVHDR AQVFVLCSSD DKERRPTYIG TIERWSNEKL 240 LLPNTKCASN ISLIVLVENM GRVNYGQYMF DRKGILSSVY LDGRILDGWK MITIPLHTLN 300 EVPRTNLITL VAHSRIVTSS ALRKLEDSGR FSEIYKMQEY HLPVSKEPAL YTAHFSIEKD 360 NQVKDTFISF SGWGKGIAFV NDFNIGRYWP SFGPQCTLYV PAPILHRGEN VLVILELESH 420 HPELVVNSVD QPDFTCGSSK SNVHQL* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 7.0e-7 | 350 | 415 | 69 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| PLN03059 | PLN03059 | 4.0e-9 | 13 | 122 | 112 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-39 | 1 | 128 | 128 | + Glycosyl hydrolases family 35. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD28499.1 | 0 | 1 | 446 | 60 | 492 | Galactose-binding like [Medicago truncatula] |
| EMBL | CBI35958.1 | 0 | 1 | 443 | 283 | 707 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002280228.1 | 0 | 1 | 443 | 259 | 683 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002327549.1 | 0 | 1 | 446 | 217 | 643 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527397.1 | 0 | 1 | 446 | 177 | 605 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0 | 1 | 444 | 217 | 629 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thd_C | 0 | 1 | 444 | 217 | 629 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thd_B | 0 | 1 | 444 | 217 | 629 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thd_A | 0 | 1 | 444 | 217 | 629 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| PDB | 3thc_D | 0 | 1 | 444 | 217 | 629 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CO123388 | 302 | 58 | 358 | 0 |
| EY707224 | 308 | 105 | 412 | 0 |
| FP048370 | 236 | 34 | 269 | 0 |
| GO030249 | 274 | 173 | 444 | 0 |
| EC919989 | 268 | 116 | 383 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |