| Basic Information | |
|---|---|
| Species | Manihot esculenta |
| Cazyme ID | cassava4.1_034364m |
| Family | GH14 |
| Protein Properties | Length: 391 Molecular Weight: 44400.7 Isoelectric Point: 7.5813 |
| Chromosome | Chromosome/Scaffold: 03175 Start: 404757 End: 406276 |
| Description | chloroplast beta-amylase |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 1 | 332 | 0 |
| ISLPNWVLNEIDKDPDLAYCDRFGRRSTEYISLGCDTLPVLRGRSPVQAYADFMRNFRDTFRSLLGEIITGIQVGMGPAGELRYPFCPPEQLAQASHSHL LGEFHCYDKYMLASLNASAHEVGMLREWGNGGPIGASSLVHDPENTEFFSSDGTWNKPYGKFFLEWYSGMLLLHGQRICMDVDNIFRGIEINKSAKVAVI HWHCGTQSHPAELTAGYYNTSTRNGYLPITEMFRRYGFSMCCTGFEMQDVEKKSLKSANSPEGFLRQLVWAARIYGIPLEGENATAIWDDESFQQVLKIR RFYSYGLKKPSFSFNFVRMDRNMFQEQNWIEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 391 Download |
| ISLPNWVLNE IDKDPDLAYC DRFGRRSTEY ISLGCDTLPV LRGRSPVQAY ADFMRNFRDT 60 FRSLLGEIIT GIQVGMGPAG ELRYPFCPPE QLAQASHSHL LGEFHCYDKY MLASLNASAH 120 EVGMLREWGN GGPIGASSLV HDPENTEFFS SDGTWNKPYG KFFLEWYSGM LLLHGQRICM 180 DVDNIFRGIE INKSAKVAVI HWHCGTQSHP AELTAGYYNT STRNGYLPIT EMFRRYGFSM 240 CCTGFEMQDV EKKSLKSANS PEGFLRQLVW AARIYGIPLE GENATAIWDD ESFQQVLKIR 300 RFYSYGLKKP SFSFNFVRMD RNMFQEQNWI EFSNFVRKMS AGKLFGAKLG LGDGGSIPFP 360 PARQILYVNR HHTLTIVHNS MISELVVKMH * 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02161 | PLN02161 | 6.0e-68 | 1 | 340 | 347 | + beta-amylase | ||
| PLN02905 | PLN02905 | 2.0e-68 | 1 | 339 | 342 | + beta-amylase | ||
| PLN02801 | PLN02801 | 8.0e-83 | 1 | 339 | 344 | + beta-amylase | ||
| PLN00197 | PLN00197 | 1.0e-121 | 1 | 339 | 342 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 9.0e-129 | 1 | 340 | 342 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN65860.1 | 0 | 1 | 357 | 179 | 534 | hypothetical protein [Vitis vinifera] |
| GenBank | EEC70262.1 | 0 | 1 | 349 | 28 | 374 | hypothetical protein OsI_01068 [Oryza sativa Indica Group] |
| RefSeq | XP_002263816.1 | 0 | 1 | 357 | 268 | 623 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297961.1 | 0 | 1 | 352 | 183 | 534 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304568.1 | 0 | 1 | 340 | 98 | 437 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1fa2_A | 0 | 1 | 341 | 106 | 445 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
| PDB | 1b1y_A | 0 | 1 | 341 | 99 | 437 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xgi_A | 0 | 1 | 341 | 103 | 441 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xgb_A | 0 | 1 | 341 | 103 | 441 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 2xg9_A | 0 | 1 | 341 | 103 | 441 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
|---|
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| JK654693 | 233 | 1 | 233 | 0 |
| GT619065 | 226 | 1 | 225 | 0 |
| HO624546 | 341 | 1 | 339 | 0 |
| HO593646 | 339 | 3 | 339 | 0 |
| EV266124 | 235 | 39 | 272 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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