y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.TU.contig_28309.1 |
Family | GH17 |
Protein Properties | Length: 72 Molecular Weight: 7618.51 Isoelectric Point: 4.424 |
Chromosome | Chromosome/Scaffold: 28309 Start: 10240 End: 10455 |
Description | beta-1,3-glucanase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 9 | 69 | 7.1e-21 |
DPPLNYQSLFDAIHDSVLATLEKIGGGSLEIVVSESGWQSAGGTVTSIDNARTYNNNLIQH |
Full Sequence |
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Protein Sequence Length: 72 Download |
MATIVVFNDP PLNYQSLFDA IHDSVLATLE KIGGGSLEIV VSESGWQSAG GTVTSIDNAR 60 TYNNNLIQHV K* 120 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 1.0e-26 | 8 | 71 | 64 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF33405.1 | 7e-27 | 9 | 71 | 233 | 295 | AF230109_1 beta-1,3 glucanase [Populus tremula x Populus alba] |
GenBank | AAM12898.1 | 1e-25 | 2 | 71 | 6 | 75 | AF494405_1 beta-1,3-glucanase [Malus x domestica] |
RefSeq | XP_002308018.1 | 1e-25 | 8 | 69 | 233 | 294 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323325.1 | 6e-28 | 2 | 71 | 87 | 156 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002533898.1 | 7e-27 | 6 | 71 | 144 | 209 | Glucan endo-1,3-beta-glucosidase, basic isoform precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 7e-18 | 14 | 71 | 211 | 268 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3f55_C | 7e-18 | 14 | 71 | 211 | 268 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3f55_B | 7e-18 | 14 | 71 | 211 | 268 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3f55_A | 7e-18 | 14 | 71 | 211 | 268 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 3em5_D | 7e-18 | 14 | 71 | 211 | 268 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX266547 | 67 | 5 | 71 | 9e-35 |
EL784282 | 70 | 2 | 71 | 2e-34 |
EX254652 | 70 | 2 | 71 | 4e-33 |
EX260067 | 70 | 2 | 71 | 3e-32 |
EX268938 | 70 | 2 | 71 | 4e-32 |
Sequence Alignments (This image is cropped. Click for full image.) |
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