Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.TU.contig_33237.2 |
Family | GH3 |
Protein Properties | Length: 539 Molecular Weight: 58918.2 Isoelectric Point: 5.1386 |
Chromosome | Chromosome/Scaffold: 33237 Start: 2723 End: 5175 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 1 | 89 | 4.5e-27 |
MEDTFQAPFRICIEQAKASCLMCSYNEVNGVPACARKDLLQKAREEWGFQGYITSDCDAVATVYEYQKYAKTATDAVADVLQAGLDIDC |
Full Sequence |
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Protein Sequence Length: 539 Download |
MEDTFQAPFR ICIEQAKASC LMCSYNEVNG VPACARKDLL QKAREEWGFQ GYITSDCDAV 60 ATVYEYQKYA KTATDAVADV LQAGLDIDCG SFMLRNTQFA VDEGKVREEQ IDRALLNLFL 120 VQLRLGLFDG DPREGFFGNL GPQDVCTPEH RMLALEAARQ GTVLLKNDNK FLPLNKNAVF 180 SLAVIGPMAN KTSDLGGGYS GYPCDGKSLF EGLQSYVKAA SYAAGCPDVA CDSDAMFDEA 240 IRAAKDADFV VVVAGLDLSA ETEDHDRVSL LLPGKQMGLV SSIAAVSKRP LILVLTGGGA 300 LDVLFAEQDP RIASILWIGY PGEAGGRALA EIIFGDFNPG GRLPVTWYPE SFTKVPMNDM 360 RMRANHSTGY PGRTYRFYTG PRVYGFGQGL SYTNYTYKLL SAPNKLNLLR FITGTSTRNM 420 LQQGGEQLNY LNVDEIKSCD SLRFSVGISV MNAGEMDGSH VVMLFSKVAK NLEGTPEKQL 480 IGFDRIHTKS YRSTETSIMV DPCKHLSIAN VYGKRVIPLG NHVIMVGDLE HFISVEID* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00933 | Glyco_hydro_3 | 3.0e-25 | 1 | 114 | 118 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 2.0e-27 | 1 | 206 | 214 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 8.0e-51 | 162 | 393 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 3.0e-51 | 8 | 527 | 563 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 1 | 537 | 539 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC41913.1 | 0 | 1 | 537 | 194 | 732 | putative beta-xylosidase [Arabidopsis thaliana] |
EMBL | CBI25718.1 | 0 | 1 | 537 | 233 | 768 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_196618.1 | 0 | 1 | 537 | 254 | 792 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002264031.1 | 0 | 1 | 537 | 254 | 789 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299457.1 | 0 | 1 | 537 | 243 | 779 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 5.99756e-43 | 1 | 527 | 205 | 722 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3u48_A | 5.99756e-43 | 1 | 527 | 205 | 722 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3u4a_B | 3.00018e-42 | 1 | 527 | 205 | 722 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3u4a_A | 3.00018e-42 | 1 | 527 | 205 | 722 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 4i8d_B | 5e-25 | 1 | 527 | 182 | 699 | A Chain A, Crystal Structure Of Beta-D-Glucoside Glucohydrolase From Trichoderma Reesei |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX255705 | 284 | 135 | 418 | 0 |
EX275463 | 341 | 176 | 516 | 0 |
EC924335 | 283 | 255 | 537 | 0 |
EX275463 | 78 | 448 | 522 | 9e-24 |
EX255705 | 22 | 419 | 440 | 0.006 |
Sequence Alignments (This image is cropped. Click for full image.) |
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