Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_0.14 |
Family | GH3 |
Protein Properties | Length: 766 Molecular Weight: 82764.2 Isoelectric Point: 7.0696 |
Chromosome | Chromosome/Scaffold: 0 Start: 352030 End: 355328 |
Description | beta-D-xylosidase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 78 | 327 | 0 |
SVSRLGIPKYEWWSEALHGVSYVGPGTHFSNVVPGATSFPQVILTAASFNASLFQAIGKVVSTEARAMYNVRLAGLTFWSPNINIFRDPRWGRGQETPGE DPLLSSKYASGYVRGLQQSDDGNPNRLKVAACCKHYTAYDLDNWKGVDRYHFNAVVTKQDMDDTFQPPFKSCVIDGNVASVMCSYNKVNGKPTCADPDLL EGVIRGQWKLNGYIVSDCDSVDVLFNSQHYTKTPEEAAAVSILAGLDLNC |
Full Sequence |
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Protein Sequence Length: 766 Download |
MAPFNLSVFL SFLVLFQFWI RVVGQSSPVF ACDVDSNPEL GSYGFCNRTL EVESRVVDLV 60 KRLTLQEKIG FLVNSAGSVS RLGIPKYEWW SEALHGVSYV GPGTHFSNVV PGATSFPQVI 120 LTAASFNASL FQAIGKVVST EARAMYNVRL AGLTFWSPNI NIFRDPRWGR GQETPGEDPL 180 LSSKYASGYV RGLQQSDDGN PNRLKVAACC KHYTAYDLDN WKGVDRYHFN AVVTKQDMDD 240 TFQPPFKSCV IDGNVASVMC SYNKVNGKPT CADPDLLEGV IRGQWKLNGY IVSDCDSVDV 300 LFNSQHYTKT PEEAAAVSIL AGLDLNCGSF LGQHTGAAVK AGLLNESAID KAISNNFATL 360 MRLGFFDGNP SNQIYGKLGP KDVCTPENQE LAREAARQGI VLLKNTAGSL PLSPSTIKTL 420 AVIGPNSNVT KTMIGNYEGT PCRYTTPLQG LAASVATTYL PGCSNVACSS AQVDEAKKIA 480 ASADATVLVM GADQSIEAES RDRVDLLLPG QQPLLITEVA KIAKGPVILV IMSGGGMDIT 540 FSKNDDKVTS ILWVGYPGEA GGAAIADVIF GYHNPSGRLP MTWYPEAYVD KVPMTNMNMR 600 ADQSKGYPGR TYRFYTGETV YAFGDGLSYS QFKHKLVKAP KLVSITLEED HVCYSSECKS 660 VDALHQSCEN LGFDVHLRVK NTGKISGSHT VFLFSSSPSV HNAPRKHLVG FEKVSLAGEG 720 ETLVRFKVDV CKDLSVVGED GTRKVGLGQH LLHIGTLKHS LTVGI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 4.0e-56 | 80 | 464 | 391 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-61 | 400 | 630 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 2.0e-62 | 64 | 355 | 322 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 2.0e-81 | 19 | 730 | 801 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 26 | 765 | 761 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39114.1 | 0 | 6 | 765 | 11 | 774 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264183.1 | 0 | 6 | 765 | 203 | 966 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268626.1 | 0 | 23 | 765 | 26 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298197.1 | 0 | 27 | 765 | 1 | 741 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513707.1 | 0 | 21 | 765 | 32 | 777 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 114 | 755 | 91 | 722 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3u48_A | 0 | 114 | 755 | 91 | 722 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3u4a_B | 0 | 114 | 755 | 91 | 722 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 3u4a_A | 0 | 114 | 755 | 91 | 722 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 2x41_A | 1e-37 | 54 | 764 | 2 | 714 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT755899 | 295 | 72 | 366 | 0 |
DT556104 | 293 | 221 | 513 | 0 |
HO798199 | 369 | 394 | 760 | 0 |
HS065707 | 276 | 62 | 337 | 0 |
HO799547 | 321 | 197 | 517 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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