Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_1.13 |
Family | GT47 |
Protein Properties | Length: 434 Molecular Weight: 49917.6 Isoelectric Point: 9.9815 |
Chromosome | Chromosome/Scaffold: 1 Start: 334456 End: 336126 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 79 | 377 | 0 |
NLKIFVYELPSKYNTDWLSNERCSTHLFASEVAIHKALLTSHVRTLDPYEADFFFVPVYVSCNFSTINGFPAIGHARSLISSSIQLISSQYVFWNRTRGY DHVFVASHDYGACFHAMEDRAIADGIPEFMKNSIVLQTFGVKYKHPCQDVENVVIPPYIPTESIRRTLERAPITGRRDILVFFRGKMEVNPKNVSGRYYS KRVRTVIWKKFSGDRRFYLQRHRFAGYQSEIVRSVFCLCPLGWAPWSPRLVESVAFGCVPVIIADDIQLPFPWAVKWPEISLTVAEKDANKLGKILEHV |
Full Sequence |
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Protein Sequence Length: 434 Download |
MRLLHKGGRH LQQQEKNLCF KYYKWVLWFS LTFYFLTSYF ITHKPIPPSK THLLSNPKSS 60 LASRALIEST AIQSGLFNNL KIFVYELPSK YNTDWLSNER CSTHLFASEV AIHKALLTSH 120 VRTLDPYEAD FFFVPVYVSC NFSTINGFPA IGHARSLISS SIQLISSQYV FWNRTRGYDH 180 VFVASHDYGA CFHAMEDRAI ADGIPEFMKN SIVLQTFGVK YKHPCQDVEN VVIPPYIPTE 240 SIRRTLERAP ITGRRDILVF FRGKMEVNPK NVSGRYYSKR VRTVIWKKFS GDRRFYLQRH 300 RFAGYQSEIV RSVFCLCPLG WAPWSPRLVE SVAFGCVPVI IADDIQLPFP WAVKWPEISL 360 TVAEKDANKL GKILEHVAAT NLSTIQRNLW DPITRGALLF NVEVKEGDAT WQILDALSKK 420 LERSYRRSRV SSK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-68 | 80 | 374 | 303 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33322.1 | 0 | 1 | 432 | 1 | 441 | secondary cell wall-related glycosyltransferase family 47 [Populus tremula x Populus tremuloides] |
GenBank | ABI64067.1 | 0 | 1 | 433 | 1 | 442 | glycosyltransferase GT47C [Populus tremula x Populus alba] |
RefSeq | XP_002275679.1 | 0 | 1 | 422 | 17 | 441 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002314302.1 | 0 | 1 | 433 | 21 | 462 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523710.1 | 0 | 1 | 433 | 18 | 461 | transferase, putative [Ricinus communis] |