y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_106.54 |
Family | GH3 |
Protein Properties | Length: 783 Molecular Weight: 84751.5 Isoelectric Point: 5.2326 |
Chromosome | Chromosome/Scaffold: 106 Start: 643132 End: 646489 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 72 | 327 | 0 |
AGVPRLGVPAYEWWSEALHGVSNVGPGVHFNATVPAATSFPAVILSGASFNTTLWLDMGQVVSTEARAMYNVGLAGLTYWSPTINVFRDPRWGRGQETPG EDPLVVSRYAVNYVRGLQEVIGGDDGDGDRRRLKVSSCCKHYTAYDVDNWKGVDRFHFDAKVTKQDMEDTYQPPFRSCVEEGHVSSVMCSYNRVNGIPTC ADPNLLTGIIRGQWNLDGYIVSDCDSIEVYYNAIRYTDTPEDAAALALKAGLNMNC |
Full Sequence |
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Protein Sequence Length: 783 Download |
MYRLLPLFLS LLLTTIPTPR CNSQQFACDE TLPATSQYPF CNTSLPYPDR AKDLVSRLTL 60 QEKVKQLVNK AAGVPRLGVP AYEWWSEALH GVSNVGPGVH FNATVPAATS FPAVILSGAS 120 FNTTLWLDMG QVVSTEARAM YNVGLAGLTY WSPTINVFRD PRWGRGQETP GEDPLVVSRY 180 AVNYVRGLQE VIGGDDGDGD RRRLKVSSCC KHYTAYDVDN WKGVDRFHFD AKVTKQDMED 240 TYQPPFRSCV EEGHVSSVMC SYNRVNGIPT CADPNLLTGI IRGQWNLDGY IVSDCDSIEV 300 YYNAIRYTDT PEDAAALALK AGLNMNCGDY LGKYTENAVK LNKVEESVVD EALLYNYVVL 360 MRLGLFDGDP RSLPFGNLGP SDVCADDHQR LAVDAARQGI VLLYNNGALP LSINTTKSLA 420 VIGPNANATT VMISNYAGIP CGYISPVEGL KKYVSTNSVL YSAGCGDVKC GDEGLIKEAM 480 ETAAAAEDAV VVVVGLDQSV EAEGVDRVNL TLPGFQEKLV VEVVNATRES TKVILVIMSA 540 GPVDVSFVRN LKKVAGILWV GYPGQGGGDT IAQIISALTC YDQSYADQVP MTDMTMRPNT 600 SSNFPGRTYR LFTGKPIYEF GHGLSYSTFS TFIISAPSTL LIPLHPHNIL VSSTVIDVSE 660 VDCNDLKVDL VIGVKNNGPM NGTHVVMVFW KPPTGSGAVG GAPRLQLVGF ERVEVEVGKT 720 KIVRKEIDVC EEMSLVDADG RRKLVTGVHT IVVGAASDRR VQHRLNVRVA ETASGVGGFV 780 SV* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-34 | 400 | 628 | 235 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 1.0e-52 | 69 | 427 | 366 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 5.0e-55 | 33 | 729 | 796 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 1.0e-63 | 59 | 352 | 324 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PLN03080 | PLN03080 | 0 | 23 | 769 | 770 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB02547.1 | 0 | 9 | 770 | 9 | 774 | beta-1,4-xylosidase [Arabidopsis thaliana] |
EMBL | CAN82161.1 | 0 | 4 | 772 | 8 | 789 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_188596.1 | 0 | 9 | 770 | 9 | 774 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002264114.1 | 0 | 4 | 772 | 32 | 813 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002527511.1 | 0 | 23 | 781 | 22 | 796 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 1.00053e-42 | 109 | 766 | 91 | 734 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 3u48_A | 1.00053e-42 | 109 | 766 | 91 | 734 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 3u4a_B | 4.99983e-42 | 109 | 766 | 91 | 734 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 3u4a_A | 4.99983e-42 | 109 | 766 | 91 | 734 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
PDB | 2x41_A | 1e-34 | 49 | 771 | 2 | 715 | A Chain A, Xylanase 10a From Sreptomyces Lividans. Cellobiosyl-Enzyme Intermediate At 1.7 A |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES793662 | 349 | 287 | 625 | 0 |
BX838810 | 317 | 24 | 340 | 0 |
DY932965 | 308 | 39 | 346 | 0 |
DT755899 | 303 | 64 | 366 | 0 |
BX837031 | 309 | 24 | 332 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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