Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_1071.2 |
Family | GH3 |
Protein Properties | Length: 778 Molecular Weight: 84625.9 Isoelectric Point: 8.7418 |
Chromosome | Chromosome/Scaffold: 1071 Start: 7490 End: 11140 |
Description | beta-xylosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 78 | 325 | 0 |
PVPRLGIQGYEWWSEALHGVSNTGPGVKFGSQFPGATSFPQVITTAASFNQSLWVQIGRVVSDEARAMYNGGVAGLTYWSPNVNIFRDPRWGRGQETPGE DPGMAGKYAASYVRGLQSITGKNRLKVAACCKHYTAYDLDNWNKVDRFHFNAKVSKQDLEDTFNVPFKVCVREGNVASVMCSYNQVNGKPTCADPDLLKN TIRGQWGLDGYIVSDCDSVEVLYADQHYTATPEEAAAITVKAGLNLDC |
Full Sequence |
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Protein Sequence Length: 778 Download |
MYILKAMRTL LNVAVVMLLV VLSRVSGRAP FACDPRNGLT RTQKFCNANL PVHVRVRDLI 60 GRLTLQEKIR LLVNNAAPVP RLGIQGYEWW SEALHGVSNT GPGVKFGSQF PGATSFPQVI 120 TTAASFNQSL WVQIGRVVSD EARAMYNGGV AGLTYWSPNV NIFRDPRWGR GQETPGEDPG 180 MAGKYAASYV RGLQSITGKN RLKVAACCKH YTAYDLDNWN KVDRFHFNAK VSKQDLEDTF 240 NVPFKVCVRE GNVASVMCSY NQVNGKPTCA DPDLLKNTIR GQWGLDGYIV SDCDSVEVLY 300 ADQHYTATPE EAAAITVKAG LNLDCGPFLA VHTEQAIKKQ LMNEEDVNIA LEYTITVQMR 360 LGMFDGEPSS QEYGHLGPEH VCTPAHQQLA LEAARQGIVL LKNTGKSLPL STSRHRYVAV 420 IGPNSDVTQT MIGNYAGVPC GYTSPLQGIS KYARAVHQPG CNGVACPSNE KFHDAEVAAR 480 NSDATVLIMG LDQSIEQEGR DKINLLLPGH QQELVERAAM ASRGPVILVL MCGSPVDVSF 540 AKNNPRIGAI LWVGYPGQAG GAAIADVLFG TTNPGGKLPM TWYPQDYLAK APMTRMDMRA 600 SGNYPGRTYR FYKGPVVFPF GHGLSYTKFT HSLSTAPTQV LVPLSSTATS LFATKNSTMS 660 TNTIRVSHAN CNALEPLTIH VDVINTGPMD GAHVLLVFSA PSEKSKGSPI KQLVSFEKVH 720 VMAGSKQRVK IDVHACKHLS VADEFGVRRI PLGEHNLHIG DLKHSISIQT TLKDIKP* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 2.0e-56 | 80 | 462 | 388 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-59 | 59 | 352 | 300 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-63 | 398 | 627 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-77 | 114 | 737 | 685 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 26 | 769 | 760 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP83934.1 | 0 | 16 | 772 | 11 | 765 | auxin-induced beta-glucosidase [Chenopodium rubrum] |
GenBank | AAS17751.2 | 0 | 9 | 776 | 10 | 771 | beta xylosidase [Fragaria x ananassa] |
DDBJ | BAG28345.1 | 0 | 25 | 763 | 22 | 762 | arabinofuranosidase [Citrus unshiu] |
RefSeq | XP_002316021.1 | 0 | 25 | 776 | 22 | 767 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519194.1 | 0 | 25 | 776 | 36 | 781 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 114 | 733 | 91 | 696 | A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase In Three Different Conformations |
PDB | 3u48_A | 0 | 114 | 733 | 91 | 696 | A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase In Three Different Conformations |
PDB | 3u4a_B | 0 | 114 | 733 | 91 | 696 | A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase In Three Different Conformations |
PDB | 3u4a_A | 0 | 114 | 733 | 91 | 696 | A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase In Three Different Conformations |
PDB | 2x41_A | 6.00036e-42 | 55 | 772 | 3 | 711 | A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase In Three Different Conformations |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GW867030 | 308 | 59 | 366 | 0 |
GW867097 | 309 | 58 | 366 | 0 |
DT564937 | 291 | 23 | 313 | 0 |
DT547178 | 290 | 23 | 312 | 0 |
BX838810 | 315 | 25 | 339 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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