Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_112.57 |
Family | GH3 |
Protein Properties | Length: 607 Molecular Weight: 66066.1 Isoelectric Point: 4.8744 |
Chromosome | Chromosome/Scaffold: 112 Start: 462391 End: 468647 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 83 | 318 | 0 |
LKSRLGIPIIYGVDAVHGNNNVYGATIFPQNVGLGATGDADLVQRIGVATALEVRASGAPWTFAPCVAVCSDPRWGRCYESYSEDTEVVKKMACIVTGLQ GQPPEGHPNGYPFVAGRKNVIACAKHFAGDGGTDRGINEGNTIVSYDDLERIHISPYVDCISQGVSTVMASYNSWNDSKLHTDRFLLTEVLKDKLGFKGF VVSDWEGVDRITEPQGSNYRNSVAAAVNAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 607 Download |
MMNCVYKNPN ESVEARVQDL LSRMTLKDKI YQMTQIECRV ATPSNIKNLG FGSILSGGGS 60 GPFEKAESSD WADMIDGFQV SALKSRLGIP IIYGVDAVHG NNNVYGATIF PQNVGLGATG 120 DADLVQRIGV ATALEVRASG APWTFAPCVA VCSDPRWGRC YESYSEDTEV VKKMACIVTG 180 LQGQPPEGHP NGYPFVAGRK NVIACAKHFA GDGGTDRGIN EGNTIVSYDD LERIHISPYV 240 DCISQGVSTV MASYNSWNDS KLHTDRFLLT EVLKDKLGFK GFVVSDWEGV DRITEPQGSN 300 YRNSVAAAVN AGIDMVMVPF KYEQFVEDLT FEVESGEVPI SRIDDAVERI LRVKFVSGIF 360 EHPFTDRSLL DIVGCKEHRD LAREAVRKSL VLLKNGKSPH EPFLPLDKNA TKILVVGTHA 420 DNLGYQCGGW TATWFGGSGR ITVGSTLLDA VKGAVGDKTE IIYEQNPSKE TLRRQDFSFA 480 IVAVGEPPYA ETLGDNSELV IPFDGSEVIS LVADRIPTLA ILISGRPLVL EPQVLEKVDA 540 LIAAWLPGSE GEGITDVIFG DYDFTGKLPV SWFRKVEQLP MNAKANSYDP LFPLGFGLTC 600 KRKLLT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 1.0e-41 | 8 | 588 | 622 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 1.0e-46 | 390 | 599 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 1.0e-84 | 25 | 353 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 1.0e-85 | 9 | 599 | 660 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 1.0e-86 | 79 | 439 | 369 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81230.1 | 0 | 2 | 603 | 1 | 635 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_190284.1 | 0 | 3 | 601 | 7 | 606 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002279757.1 | 0 | 2 | 603 | 113 | 716 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313393.1 | 0 | 3 | 601 | 5 | 597 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525596.1 | 0 | 1 | 599 | 1 | 599 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 5 | 599 | 4 | 598 | A Chain A, Cyclodextrin Glucanotransferase (E.C.2.4.1.19) (Cgtase) |
PDB | 1x38_A | 0 | 5 | 599 | 4 | 598 | A Chain A, Cyclodextrin Glucanotransferase (E.C.2.4.1.19) (Cgtase) |
PDB | 1lq2_A | 0 | 5 | 599 | 4 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 5 | 599 | 4 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 5 | 599 | 4 | 598 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 328 | 132 | 459 | 0 |
HO784016 | 418 | 62 | 478 | 0 |
EL455042 | 311 | 62 | 372 | 0 |
FC882555 | 290 | 132 | 421 | 0 |
HO784016 | 43 | 6 | 48 | 0.007 |
Sequence Alignments (This image is cropped. Click for full image.) |
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