Basic Information | |
---|---|
Species | Carica papaya |
Cazyme ID | evm.model.supercontig_119.3 |
Family | AA1 |
Protein Properties | Length: 553 Molecular Weight: 62107.1 Isoelectric Point: 9.4123 |
Chromosome | Chromosome/Scaffold: 119 Start: 25915 End: 27755 |
Description | SKU5 similar 12 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 38 | 504 | 0 |
TIFPLGVPQQGILINGQFPGPNINSTTNNNIVINVFNNIDQPLLFTWSGVQHRKNSWQDGVEGTMCPILPGTNFTYRFQVKDQIGSYFYYPSTAMQRAAG GFGGLRVNSRLLIPVPYADPEDDYTVLIGDWYAKSHTALEKFLESGRSIGRPQGVLINGKAGKADGKDEPLFTMKPGKTYKYRICNIGLKNSLNFRIQNH KMKLVEMEGSHVLQNVYDSLDVHVGQCYAVLVTADQKPLDYYMVASTRFTKQVLSTTGIIRYEGSKVQASPQLPAAPVGWAWSLNQFRSFRWNLTASAAR PNPQGSYRYGSINITRTIKLVNSANKVDGKLRYAISGVSHVDTETPLKLVEYFGAADKAFKYNIIADEPPAKIANVIKEPNVINITHRTFVEIIFENHEK TIQSWHLDGYSFFAVAIEPGTWTPEKRKNYNLLDAVSRHTIQVFPKSWAAIMLTFDNCGMWNVRSEM |
Full Sequence |
---|
Protein Sequence Length: 553 Download |
MGRGVMLISL VCLLVGTLQV VRSEDPYLFF TWNVTYGTIF PLGVPQQGIL INGQFPGPNI 60 NSTTNNNIVI NVFNNIDQPL LFTWSGVQHR KNSWQDGVEG TMCPILPGTN FTYRFQVKDQ 120 IGSYFYYPST AMQRAAGGFG GLRVNSRLLI PVPYADPEDD YTVLIGDWYA KSHTALEKFL 180 ESGRSIGRPQ GVLINGKAGK ADGKDEPLFT MKPGKTYKYR ICNIGLKNSL NFRIQNHKMK 240 LVEMEGSHVL QNVYDSLDVH VGQCYAVLVT ADQKPLDYYM VASTRFTKQV LSTTGIIRYE 300 GSKVQASPQL PAAPVGWAWS LNQFRSFRWN LTASAARPNP QGSYRYGSIN ITRTIKLVNS 360 ANKVDGKLRY AISGVSHVDT ETPLKLVEYF GAADKAFKYN IIADEPPAKI ANVIKEPNVI 420 NITHRTFVEI IFENHEKTIQ SWHLDGYSFF AVAIEPGTWT PEKRKNYNLL DAVSRHTIQV 480 FPKSWAAIML TFDNCGMWNV RSEMWERRYL GQQLYASVLS PAHSLRDEYN IPDNTPLCGI 540 VKGLPLPKPY TI* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02354 | PLN02354 | 0 | 1 | 552 | 552 | + copper ion binding / oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 6 | 539 | 535 | + oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 9 | 543 | 535 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 13 | 539 | 529 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 5 | 542 | 550 | + copper ion binding / pectinesterase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_175953.1 | 0 | 1 | 550 | 1 | 552 | sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002297609.1 | 0 | 4 | 552 | 3 | 553 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002299087.1 | 0 | 4 | 552 | 3 | 551 | hypothetical protein POPTRDRAFT_750403 [Populus trichocarpa] |
RefSeq | XP_002303974.1 | 0 | 4 | 552 | 3 | 553 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523382.1 | 0 | 4 | 552 | 3 | 551 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 30 | 511 | 6 | 516 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
PDB | 1asq_A | 0 | 30 | 511 | 6 | 516 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
PDB | 1asp_B | 0 | 30 | 511 | 6 | 516 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
PDB | 1asp_A | 0 | 30 | 511 | 6 | 516 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
PDB | 1aso_B | 0 | 30 | 511 | 6 | 516 | A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EG020403 | 340 | 108 | 447 | 0 |
CX188785 | 290 | 77 | 366 | 0 |
DY021075 | 294 | 238 | 531 | 0 |
JG076426 | 318 | 237 | 553 | 0 |
DT762768 | 313 | 244 | 551 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|