y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_12.148 |
Family | GH14 |
Protein Properties | Length: 432 Molecular Weight: 48793.8 Isoelectric Point: 8.7651 |
Chromosome | Chromosome/Scaffold: 12 Start: 1384777 End: 1389771 |
Description | beta-amylase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 91 | 430 | 0 |
FVMMPVDTFGIDSSGSPRIKRIRALTVSLKALKLAGVHGIAVEVWWGIVERFSPFEYNWSLYEELFKLISNSGLKLHVALCFHSNMHSSSRKEGVTLPLW ILEIGDLNKDIYYRDKKGFSNDDYLTLGVDQLPLFCGRTALQCYEDFMLSFVNKFDSLIGSVIEELSVGLGPSGELRYPSHPFGDGRWKFPGIGEFQCYD KYMMEDLKMAACQEGKPQWGERGPQNAGCYNSLPSGVPFFEEGHESFISDYGHFFLEWYSGRLICHADAILAKAASILRKYQENKQTSVVLVAKIGGVYW WYQTVSHPAELTAGYYNTALRDGYDPVASVLSRHGAALHI |
Full Sequence |
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Protein Sequence Length: 432 Download |
MAENRGLACK CGPTRGSFCH GFTRDSSFDH SARRTRNFIR NVSMIPLFRR GRVVTKWRFV 60 AGNSRIFSMD ARERSRSTIL ESSKHKRIPV FVMMPVDTFG IDSSGSPRIK RIRALTVSLK 120 ALKLAGVHGI AVEVWWGIVE RFSPFEYNWS LYEELFKLIS NSGLKLHVAL CFHSNMHSSS 180 RKEGVTLPLW ILEIGDLNKD IYYRDKKGFS NDDYLTLGVD QLPLFCGRTA LQCYEDFMLS 240 FVNKFDSLIG SVIEELSVGL GPSGELRYPS HPFGDGRWKF PGIGEFQCYD KYMMEDLKMA 300 ACQEGKPQWG ERGPQNAGCY NSLPSGVPFF EEGHESFISD YGHFFLEWYS GRLICHADAI 360 LAKAASILRK YQENKQTSVV LVAKIGGVYW WYQTVSHPAE LTAGYYNTAL RDGYDPVASV 420 LSRHGAALHI S* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 1.0e-94 | 88 | 431 | 345 | + beta-amylase | ||
PLN02801 | PLN02801 | 5.0e-111 | 88 | 431 | 345 | + beta-amylase | ||
PLN00197 | PLN00197 | 1.0e-116 | 58 | 431 | 376 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 3.0e-122 | 66 | 431 | 372 | + beta-amylase | ||
PLN02161 | PLN02161 | 0 | 1 | 431 | 435 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK76508.1 | 0 | 44 | 430 | 1 | 387 | putative beta-amylase [Arabidopsis thaliana] |
DDBJ | BAH20280.1 | 0 | 30 | 430 | 1 | 401 | AT5G55700 [Arabidopsis thaliana] |
RefSeq | NP_568829.2 | 0 | 1 | 430 | 1 | 434 | BAM4 (BETA-AMYLASE 4); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_001768786.1 | 0 | 85 | 431 | 33 | 368 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002265698.1 | 0 | 1 | 431 | 1 | 426 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdr_A | 0 | 88 | 431 | 12 | 342 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1q6d_A | 0 | 88 | 431 | 12 | 342 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
PDB | 1b1y_A | 0 | 84 | 431 | 2 | 336 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1uko_D | 0 | 88 | 431 | 12 | 342 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_C | 0 | 88 | 431 | 12 | 342 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE621838 | 253 | 142 | 394 | 0 |
EV096717 | 235 | 111 | 345 | 0 |
GO368294 | 292 | 123 | 413 | 0 |
GE603580 | 256 | 111 | 366 | 0 |
DR912923 | 196 | 69 | 264 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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