y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_129.18 |
Family | GH3 |
Protein Properties | Length: 250 Molecular Weight: 27246.8 Isoelectric Point: 8.3298 |
Chromosome | Chromosome/Scaffold: 129 Start: 140570 End: 141319 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 81 | 238 | 7.2e-39 |
AIPRLGIPAYQWWSESLHGIATNGPGVSFNGTVSSATSFPQVIVSAASFNRSLWLKIGSAIAVEARGMYNVGQAGLTFWAPNINIFRDPRWGRGQETPGE DPMVVSAYATEFVRGFQGGDLNASSHFAGGLNGDRLMLSACCKHLTAYDLDNWGSFSR |
Full Sequence |
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Protein Sequence Length: 250 Download |
MSSSHTRLPI FFFLLQSFLF SLSISQSITS VPFPDFPCRP PGFSHYPFCD TSLSLTVRAQ 60 SLVSLLTLQE KIQQLSNNAS AIPRLGIPAY QWWSESLHGI ATNGPGVSFN GTVSSATSFP 120 QVIVSAASFN RSLWLKIGSA IAVEARGMYN VGQAGLTFWA PNINIFRDPR WGRGQETPGE 180 DPMVVSAYAT EFVRGFQGGD LNASSHFAGG LNGDRLMLSA CCKHLTAYDL DNWGSFSRYN 240 FNAVVRIQT* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 8.0e-14 | 68 | 228 | 165 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 8.0e-22 | 77 | 209 | 136 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 5.0e-29 | 67 | 209 | 170 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PLN03080 | PLN03080 | 6.0e-135 | 34 | 248 | 216 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABY48135.1 | 0 | 18 | 245 | 12 | 238 | beta-D-xylosidase [Medicago truncatula] |
EMBL | CBI25718.1 | 0 | 1 | 248 | 1 | 231 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_196618.1 | 0 | 14 | 248 | 7 | 252 | glycosyl hydrolase family 3 protein [Arabidopsis thaliana] |
RefSeq | XP_002264031.1 | 0 | 1 | 248 | 1 | 252 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299457.1 | 0 | 30 | 248 | 24 | 241 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0.0000000002 | 48 | 224 | 5 | 207 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1iex_A | 0.0000000002 | 48 | 224 | 5 | 207 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1iew_A | 0.0000000002 | 48 | 224 | 5 | 207 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1iev_A | 0.0000000002 | 48 | 224 | 5 | 207 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
PDB | 1ieq_A | 0.0000000002 | 48 | 224 | 5 | 207 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY343074 | 223 | 34 | 248 | 0 |
DK485459 | 224 | 34 | 248 | 0 |
DK472496 | 224 | 34 | 248 | 0 |
DK466911 | 224 | 34 | 248 | 0 |
EV158574 | 226 | 35 | 248 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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