Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_13.182 |
Family | GT47 |
Protein Properties | Length: 429 Molecular Weight: 48682.5 Isoelectric Point: 7.034 |
Chromosome | Chromosome/Scaffold: 13 Start: 1683492 End: 1687107 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 61 | 356 | 0 |
RLKVFVYELPSKYNKKVLQKDPRCLTHMFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPFWNRTEGA DHFFLVPHDFGACFHYQEEKAIERGILTLLQRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMQTHLIPEKTPRSIFVYFRGLFYDVGNDPEGGYYARGA RAAVWENFKDNPLFDISTEHPTTYYEDMQRAVFCLCPLGWAPWSPRLVEAVIFGCIPVIIADDIVLPFADAIPWEEIGVFVDEKDVPNLDTILTSI |
Full Sequence |
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Protein Sequence Length: 429 Download |
MFLLLKYEAA DGMKICKLLF LGIVFSALVL RIDAMRLGRS QPTERISGSA GDVLEDDPVG 60 RLKVFVYELP SKYNKKVLQK DPRCLTHMFA AEIFMHRFLL SSPVRTLNPE EADWFYTPVY 120 TTCDLTPNGL PLPFKSPRMM RSAIQLISSN WPFWNRTEGA DHFFLVPHDF GACFHYQEEK 180 AIERGILTLL QRATLVQTFG QRNHVCLKEG SITIPPYAPP QKMQTHLIPE KTPRSIFVYF 240 RGLFYDVGND PEGGYYARGA RAAVWENFKD NPLFDISTEH PTTYYEDMQR AVFCLCPLGW 300 APWSPRLVEA VIFGCIPVII ADDIVLPFAD AIPWEEIGVF VDEKDVPNLD TILTSIPPEV 360 ILRKQRLLAN PSMKQAMLFP QPAQPGDAFH QVLNGLARKL PHDKSIYLKP GERILNWTAG 420 PVGDLKPW* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 5.0e-82 | 61 | 356 | 304 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM64940.1 | 0 | 13 | 428 | 3 | 415 | unknown [Arabidopsis thaliana] |
RefSeq | NP_568941.1 | 0 | 13 | 428 | 3 | 415 | GUT1; catalytic/ glucuronoxylan glucuronosyltransferase [Arabidopsis thaliana] |
RefSeq | XP_002284685.1 | 0 | 13 | 428 | 1 | 416 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318180.1 | 0 | 13 | 428 | 1 | 417 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511079.1 | 0 | 13 | 428 | 1 | 417 | catalytic, putative [Ricinus communis] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO868810 | 331 | 74 | 404 | 0 |
EX131890 | 308 | 63 | 370 | 0 |
ES900637 | 308 | 122 | 429 | 0 |
GO846508 | 325 | 105 | 429 | 0 |
GO868810 | 22 | 404 | 425 | 0.055 |
Sequence Alignments (This image is cropped. Click for full image.) |
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