| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_132.41 |
| Family | GT19 |
| Protein Properties | Length: 407 Molecular Weight: 45623.1 Isoelectric Point: 9.2999 |
| Chromosome | Chromosome/Scaffold: 132 Start: 492532 End: 496221 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT19 | 10 | 345 | 0 |
| VFIISGEASGDTIGSRLMASLKKLSPFPVRFSGVGGSMMSNEGLKSLFPMEDIAVMGIWELLPHLYKFRAKVFERQLKLKETTEAAFMFKPHVVVTVDSK GFCFRLLKELRARYNQQRLDGPPHFHYVAPSFWAWKGGEARLRGLAKFVDHVFCILPNEEMVCRSNGLGATFVGHPILEEILEWNLRKQNIPHKWKIEGN GEDFQAKYSIPSGATVISVLPGSRLQEVTRMLPIFASTMEHLKDSFSALVTVIHVASNLHVQSYISKALHEWPVPFILIPGGSQNLKYDAFSFFVRKELL HCKSAALCTSGTVAVELQLARLPCVVAYRAHFLTEW | |||
| Full Sequence |
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| Protein Sequence Length: 407 Download |
| MAAKDGELRV FIISGEASGD TIGSRLMASL KKLSPFPVRF SGVGGSMMSN EGLKSLFPME 60 DIAVMGIWEL LPHLYKFRAK VFERQLKLKE TTEAAFMFKP HVVVTVDSKG FCFRLLKELR 120 ARYNQQRLDG PPHFHYVAPS FWAWKGGEAR LRGLAKFVDH VFCILPNEEM VCRSNGLGAT 180 FVGHPILEEI LEWNLRKQNI PHKWKIEGNG EDFQAKYSIP SGATVISVLP GSRLQEVTRM 240 LPIFASTMEH LKDSFSALVT VIHVASNLHV QSYISKALHE WPVPFILIPG GSQNLKYDAF 300 SFFVRKELLH CKSAALCTSG TVAVELQLAR LPCVVAYRAH FLTEWKLVHN EGSREEQVVS 360 AEKIIRLLWP SERTVDNLAG RNMYLELVNH APSTVAASVM LSYVKP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 1.0e-32 | 11 | 335 | 328 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 2.0e-39 | 10 | 345 | 340 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 4.0e-53 | 10 | 345 | 339 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| COG0763 | LpxB | 3.0e-72 | 8 | 345 | 340 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| PRK00025 | lpxB | 5.0e-74 | 8 | 345 | 340 | + lipid-A-disaccharide synthase; Reviewed | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 1 | 406 | 1 | 431 | unnamed protein product [Vitis vinifera] |
| GenBank | EEC71491.1 | 0 | 2 | 349 | 38 | 366 | hypothetical protein OsI_03760 [Oryza sativa Indica Group] |
| RefSeq | NP_178535.2 | 0 | 2 | 405 | 34 | 454 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002458499.1 | 0 | 2 | 344 | 13 | 338 | hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] |
| RefSeq | XP_002528957.1 | 0 | 2 | 406 | 40 | 469 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lipid IVA biosynthesis | LIPIDADISACCHARIDESYNTH-RXN | EC-2.4.1.182 | lipid-A-disaccharide synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EY717263 | 291 | 46 | 336 | 0 |
| EX272509 | 240 | 209 | 407 | 0 |
| FY429474 | 246 | 2 | 245 | 0 |
| DW017982 | 224 | 1 | 224 | 0 |
| EY717263 | 25 | 321 | 345 | 2.2 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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