CAZyme Information

Basic Information
SpeciesCarica papaya
Cazyme IDevm.model.supercontig_139.6
FamilyGH18
Protein PropertiesLength: 330 Molecular Weight: 36839.2 Isoelectric Point: 6.2302
ChromosomeChromosome/Scaffold: 139 Start: 34288 End: 35277
Description
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH18742592.9e-24
  PINPNCKFHFILSFAIDYDTSSSPSPTNGKFNIFWDSDNLSPSQVSSIKSQNSNVKVALSLGGDSVAGGSAYFSPSSTDSWVSNAVSSLTRIINNYNLDG
  IDIDYEHFDADPETFADCIGQLISTLKSNGVIQFASIAPFDDDQVQSHYLALWKKYSHLIDYVNFQFYAYDKSTTVDQFMDYFTTQ
Full Sequence
Protein Sequence     Length: 330     Download
MAFSYRIHSS RINSYTRNLL LHIAMEPRKS FIVILILQVF FTFNSPVKSA PANSNLFREY    60
IGAEFNNIRF TDVPINPNCK FHFILSFAID YDTSSSPSPT NGKFNIFWDS DNLSPSQVSS    120
IKSQNSNVKV ALSLGGDSVA GGSAYFSPSS TDSWVSNAVS SLTRIINNYN LDGIDIDYEH    180
FDADPETFAD CIGQLISTLK SNGVIQFASI APFDDDQVQS HYLALWKKYS HLIDYVNFQF    240
YAYDKSTTVD QFMDYFTTQS SNYHGGKVLV SFISDGSGGL SPENGFFTAC NRLKSRKELH    300
GIFVWSADDS MSKGFSYEKK SQALLAIFH* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd06548GH18_chitinase1.0e-782244191+
cd02871GH18_chitinase_D-like8.0e-984260195+
cd00598GH18_chitinase-like5.0e-1566241180+
pfam00704Glyco_hydro_181.0e-1682243170+
cd06544GH18_narbonin1.0e-12956310256+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAN76732.1047329306588hypothetical protein [Vitis vinifera]
EMBLCAN76732.105231325285hypothetical protein [Vitis vinifera]
RefSeqXP_002281665.10253291304PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002318148.10313293301predicted protein [Populus trichocarpa]
RefSeqXP_002532811.10253291305Chitinase 1 precursor, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3sim_B0563252273A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB3sim_A0563252273A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB1nar_A1e-38563264288A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB3chf_B0.0005117246117250A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB3chf_A0.0005117246117250A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
Metabolic Pathways
Pathway NameReactionECProtein Name
chitin degradation II3.2.1.14-RXNEC-3.2.1.14chitinase
chitin degradation IIRXN-12623EC-3.2.1.14chitinase
chitin degradation IIRXN-12624EC-3.2.1.14chitinase
chitin degradation III (carnivorous plants)3.2.1.14-RXNEC-3.2.1.14chitinase
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DY618350294343270
FQ316492265613250
FQ317099266613260
FQ317155266613260
FQ316868266613260
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_046_00008.1Aquca_014_00353.1Aquca_010_00636.1Aquca_027_00184.1
Brachypodium distachyonBradi3g26850.1Bradi3g26810.1Bradi3g26840.1
Citrus clementinaCiclev10028881mCiclev10003729m
Citrus sinensisorange1.1g021511morange1.1g046094m
Eucalyptus grandisEucgr.B02439.1Eucgr.J02106.1
Fragaria vescamrna14033.1-v1.0-hybrid.59.211mrna14019.1-v1.0-hybridmrna15882.1-v1.0-hybridmrna14034.1-v1.0-hybridmrna17899.1-v1.0-hybrid
mrna22564.1-v1.0-hybrid
Glycine maxGlyma11g15512.1Glyma09g21615.1Glyma13g40590.1
Gossypium raimondiiGorai.003G135700.1Gorai.003G135800.1Gorai.003G134100.1Gorai.003G129600.1Gorai.011G120000.1
Gorai.003G138400.1
Linum usitatissimumLus10005172
Malus domesticaMDP0000904158MDP0000885802MDP0000644797MDP0000312089
Manihot esculentacassava4.1_024209mcassava4.1_027074m
Medicago truncatulaMedtr6g079630.1Medtr2g096030.1
Mimulus guttatusmgv1a019267mmgv1a024804m
Oryza sativaLOC_Os10g28050.1LOC_Os10g28080.1
Panicum virgatumPavirv00061810mPavirv00014582mPavirv00031712m
Phaseolus vulgarisPhvul.011G069900.1
Picea abiesMA_38396g0010MA_10427109g0010
Populus trichocarpaPotri.012G102400.1Potri.015G100500.1Potri.015G100600.1Potri.001G341700.1
Prunus persicappa023801mppa009038mppa009096m
Ricinus communis30039.m00023530039.m000234
Setaria italicaSi022612mSi026720mSi028172mSi036765mSi036774m
Selaginella moellendorffii41118115493
Sorghum bicolorSb01g021920.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny