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Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_14.158 |
Family | GT35 |
Protein Properties | Length: 973 Molecular Weight: 110008 Isoelectric Point: 5.3882 |
Chromosome | Chromosome/Scaffold: 14 Start: 1814078 End: 1825811 |
Description | Glycosyl transferase, family 35 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 173 | 967 | 0 |
ALKKLGHNLEAIACQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYRYGLFKQRITKEGQEEVAEDWLEMSNPWEIVRNNVSYPVKFYGKVVSGS DGKRHWIGGEDIQAVAYDVPIPGYNTKTTINLRLWSTKATSEDFDLKDFNAGEHTKSAGALFNAEKICYVLYPGDESLEGKVLRLKQQYTLCSASLQDII ARFERRSGANIRWEEFPEKVAVQMNDTHPTLCIPELMRILIDVKGLSWKDAWNITQRTVAYTNHTVLPEALEKWSLELMQKLLPRHMEIIEMIDEEFIQT IVSEYGIADSDLLEKKLKEMRILENVDLPAAFADLIVKPKESTVAVPNEEPDNSEESKEEVNLVSEENKLENGGTQEEEQEPETKPEPEPIPVPEPPKLV RMANLCVVGGHAVNGVAEIHSEIVKNEVFNEFFQLWPKKFQNKTNGVTPRRWIRFCNPDLSKIITDWIGTEDWVLNTEMLSELKKYADNKDLQNQWRAAK RSNKMKVASFLKKKTGYSVSPDAMFDIQVKRIHEYKRQLLNILGIVYRYKVMKEMTAEERKEKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP EIGDLLKVVFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIREEVGEENFFLFGAKANEIAGLRKERAEGKFVPDP CFEEVKEFVRSGVFGPYDYNELIGSLEGNEGFGRADYFLVGKDFPSYIECQEKVDEAYRDQEKWTRMSILNTAGSPKFSSDRTIHEYARDIWKIK |
Full Sequence |
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Protein Sequence Length: 973 Download |
MATSRFCATS SGAETFLHSS SFSRLIDCGY RSSKSRLLFV RTARLPPLRR TFLVKCVSSE 60 PKQKLKDSVT EQGEAPSNLS PFAPDATSIA SSIKYHSEFT PLFSPEKFEL PKAFFATAQS 120 VRDTLIINWN ATYDFYDKLN MKQAYYLSME FLQGRALLNA VGNLGLTGAY AEALKKLGHN 180 LEAIACQEPD AALGNGGLGR LASCFLDSLA TLNYPAWGYG LRYRYGLFKQ RITKEGQEEV 240 AEDWLEMSNP WEIVRNNVSY PVKFYGKVVS GSDGKRHWIG GEDIQAVAYD VPIPGYNTKT 300 TINLRLWSTK ATSEDFDLKD FNAGEHTKSA GALFNAEKIC YVLYPGDESL EGKVLRLKQQ 360 YTLCSASLQD IIARFERRSG ANIRWEEFPE KVAVQMNDTH PTLCIPELMR ILIDVKGLSW 420 KDAWNITQRT VAYTNHTVLP EALEKWSLEL MQKLLPRHME IIEMIDEEFI QTIVSEYGIA 480 DSDLLEKKLK EMRILENVDL PAAFADLIVK PKESTVAVPN EEPDNSEESK EEVNLVSEEN 540 KLENGGTQEE EQEPETKPEP EPIPVPEPPK LVRMANLCVV GGHAVNGVAE IHSEIVKNEV 600 FNEFFQLWPK KFQNKTNGVT PRRWIRFCNP DLSKIITDWI GTEDWVLNTE MLSELKKYAD 660 NKDLQNQWRA AKRSNKMKVA SFLKKKTGYS VSPDAMFDIQ VKRIHEYKRQ LLNILGIVYR 720 YKVMKEMTAE ERKEKFVPRV CIFGGKAFAT YVQAKRIVKF ITDVGATVNH DPEIGDLLKV 780 VFVPDYNVSV AELLIPASEL SQHISTAGME ASGTSNMKFA MNGCILIGTL DGANVEIREE 840 VGEENFFLFG AKANEIAGLR KERAEGKFVP DPCFEEVKEF VRSGVFGPYD YNELIGSLEG 900 NEGFGRADYF LVGKDFPSYI ECQEKVDEAY RDQEKWTRMS ILNTAGSPKF SSDRTIHEYA 960 RDIWKIKPVE LP* 1020 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00343 | Phosphorylase | 7.0e-131 | 173 | 496 | 324 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
cd04300 | GT1_Glycogen_Phosphorylase | 7.0e-178 | 90 | 458 | 372 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 570 | 966 | 402 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
pfam00343 | Phosphorylase | 0 | 570 | 968 | 404 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
TIGR02093 | P_ylase | 0 | 570 | 966 | 402 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACJ11757.1 | 0 | 52 | 972 | 4 | 935 | alpha-1,4 glucan phosphorylase [Gossypium hirsutum] |
EMBL | CBI22291.1 | 0 | 14 | 972 | 14 | 982 | unnamed protein product [Vitis vinifera] |
Swiss-Prot | P53536 | 0 | 16 | 971 | 31 | 1002 | PHSL_VICFA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor |
RefSeq | XP_002305367.1 | 0 | 58 | 972 | 21 | 949 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002526085.1 | 0 | 8 | 972 | 2 | 977 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1z8d_A | 0 | 570 | 968 | 438 | 830 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 1z8d_A | 0 | 85 | 496 | 24 | 433 | A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose |
PDB | 2gj4_A | 0 | 570 | 968 | 426 | 818 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
PDB | 2gj4_A | 0 | 85 | 496 | 12 | 421 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
PDB | 4el5_A | 0 | 570 | 968 | 426 | 818 | A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1826 | EC-2.4.1.1 | phosphorylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778303 | 864 | 113 | 973 | 0 |
HO797178 | 401 | 573 | 973 | 0 |
HO613954 | 524 | 450 | 973 | 0 |
HO620767 | 403 | 571 | 973 | 0 |
HO778303 | 119 | 3 | 115 | 3e-20 |
Sequence Alignments (This image is cropped. Click for full image.) |
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