Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_140.31 |
Family | AA5 |
Protein Properties | Length: 552 Molecular Weight: 61472.8 Isoelectric Point: 9.6649 |
Chromosome | Chromosome/Scaffold: 140 Start: 476840 End: 478495 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 33 | 550 | 0 |
GGRWQLLQRSIGISAMHMQLLKNDRVIIYDRTDFGKSNISLPAGKCRRETNETALRVDCTAHSVEYNVLKNTFRPLMVQTDVWCSSGAVAVDGTLMQTGG FKIGERKARLFKPCDDGSCDWQEINNGINVRRWYSTNHILPSGSQIVIGGRKQYNYEFFPKTSAPNTYNLHFLMQTSDREENNLYPFVYLNVDGNLFIFA NNRAILLNYVTNKVVKTYPTMPGGEPRCYPSTGSSVMLPLKNLQAPAIQVEVIVCGGAPAGSYNKAKRNLFVDALKTCGRIKITDPNPQWVMETMPQSRV MGDMILLPNGNVLIINGGAKGSAGWELGRDPVLAPVIYRPDNAIGSRFETQNPSTIPRMYHSAAILLRDGRVLVGGSNPHIYYNFTGVVFPTDLSLEAFS PPYLDWKVSNWRPKIVSPASEFKLRYNEDLKIRFTLTARNVTEKNVRVTMVAPSFTTHSFSMNQRLLVLTTGKLISLGKSGYDISVTAPPSRILAPPGYY LLFVVSEEIPSEGIWVNI |
Full Sequence |
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Protein Sequence Length: 552 Download |
MTLSSLLYSF IFLNVLLITT QPSHRFLALA AGGGRWQLLQ RSIGISAMHM QLLKNDRVII 60 YDRTDFGKSN ISLPAGKCRR ETNETALRVD CTAHSVEYNV LKNTFRPLMV QTDVWCSSGA 120 VAVDGTLMQT GGFKIGERKA RLFKPCDDGS CDWQEINNGI NVRRWYSTNH ILPSGSQIVI 180 GGRKQYNYEF FPKTSAPNTY NLHFLMQTSD REENNLYPFV YLNVDGNLFI FANNRAILLN 240 YVTNKVVKTY PTMPGGEPRC YPSTGSSVML PLKNLQAPAI QVEVIVCGGA PAGSYNKAKR 300 NLFVDALKTC GRIKITDPNP QWVMETMPQS RVMGDMILLP NGNVLIINGG AKGSAGWELG 360 RDPVLAPVIY RPDNAIGSRF ETQNPSTIPR MYHSAAILLR DGRVLVGGSN PHIYYNFTGV 420 VFPTDLSLEA FSPPYLDWKV SNWRPKIVSP ASEFKLRYNE DLKIRFTLTA RNVTEKNVRV 480 TMVAPSFTTH SFSMNQRLLV LTTGKLISLG KSGYDISVTA PPSRILAPPG YYLLFVVSEE 540 IPSEGIWVNI Q* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd02851 | E_set_GO_C | 2.0e-27 | 444 | 550 | 108 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam09118 | DUF1929 | 9.0e-28 | 444 | 550 | 108 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
pfam07250 | Glyoxal_oxid_N | 4.0e-126 | 48 | 289 | 244 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_173419.1 | 0 | 9 | 551 | 6 | 548 | glyoxal oxidase-related [Arabidopsis thaliana] |
RefSeq | NP_177692.1 | 0 | 34 | 551 | 35 | 547 | glyoxal oxidase-related [Arabidopsis thaliana] |
RefSeq | XP_002280559.1 | 0 | 3 | 551 | 9 | 553 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301997.1 | 0 | 30 | 550 | 1 | 523 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510488.1 | 0 | 31 | 551 | 28 | 547 | Galactose oxidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2eib_A | 0.000000000000008 | 109 | 543 | 221 | 630 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2eic_A | 0.00000000000001 | 109 | 543 | 221 | 630 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 2wq8_A | 0.00000000000001 | 109 | 543 | 243 | 652 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
PDB | 1k3i_A | 0.00000000000001 | 109 | 543 | 238 | 647 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |
PDB | 1t2x_A | 0.00000000000001 | 109 | 543 | 221 | 630 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DW519295 | 324 | 1 | 323 | 0 |
CO101135 | 287 | 127 | 412 | 0 |
ES830243 | 295 | 110 | 403 | 0 |
DW517578 | 307 | 196 | 501 | 0 |
ES830243 | 77 | 378 | 451 | 0.00008 |
Sequence Alignments (This image is cropped. Click for full image.) |
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