y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_145.20 |
Family | CE8 |
Protein Properties | Length: 381 Molecular Weight: 43010.6 Isoelectric Point: 8.6864 |
Chromosome | Chromosome/Scaffold: 145 Start: 481238 End: 482675 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 80 | 369 | 0 |
NITVSQDGDGDFSTINEAIATIPTYNSRRVVVMIKPGVYREKIHIPRTMWFVTFVGDEANPPTITGNDTASVTGKDGIRLNTFQSATVAVDANYFIAINI KFQNTAVHNVGSRGEQAVALRISGTKAAFYNCSFLGAQDTLYDHKGLHYFHNCFIQGSVDFIFGYGRSFYENCELNSIGKKVAWLTAQKRSNSSLASGFS FKNCKVTGSGLVYLGRAWGDYSRVVFSYTFMDAVVLPQGWSDWGDQKRDTRVFYGEYKCSGPGANFTRRVRWERILTDEEAKPFIDTYYV |
Full Sequence |
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Protein Sequence Length: 381 Download |
MALKSHILFV LLLFVFANSI VCSSLDLQST EREYDGWISW NLKNHRKKVD LYSSMSVDET 60 IQSGRNVDRK LRKAEMYRVN ITVSQDGDGD FSTINEAIAT IPTYNSRRVV VMIKPGVYRE 120 KIHIPRTMWF VTFVGDEANP PTITGNDTAS VTGKDGIRLN TFQSATVAVD ANYFIAINIK 180 FQNTAVHNVG SRGEQAVALR ISGTKAAFYN CSFLGAQDTL YDHKGLHYFH NCFIQGSVDF 240 IFGYGRSFYE NCELNSIGKK VAWLTAQKRS NSSLASGFSF KNCKVTGSGL VYLGRAWGDY 300 SRVVFSYTFM DAVVLPQGWS DWGDQKRDTR VFYGEYKCSG PGANFTRRVR WERILTDEEA 360 KPFIDTYYVD ADTWLVPPPY * 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02634 | PLN02634 | 3.0e-99 | 52 | 377 | 328 | + probable pectinesterase | ||
PLN02432 | PLN02432 | 1.0e-104 | 81 | 375 | 295 | + putative pectinesterase | ||
PLN02671 | PLN02671 | 2.0e-107 | 65 | 375 | 317 | + pectinesterase | ||
PLN02665 | PLN02665 | 1.0e-129 | 8 | 379 | 377 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 6.0e-141 | 81 | 377 | 299 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF22736.1 | 0 | 34 | 379 | 31 | 380 | pectinesterase family protein [Brachypodium distachyon] |
EMBL | CAN79461.1 | 0 | 30 | 378 | 32 | 381 | hypothetical protein [Vitis vinifera] |
GenBank | EEC69509.1 | 0 | 65 | 379 | 93 | 412 | hypothetical protein OsI_38743 [Oryza sativa Indica Group] |
RefSeq | NP_001067039.1 | 0 | 65 | 379 | 92 | 411 | Os12g0563700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002320279.1 | 0 | 89 | 375 | 1 | 287 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 80 | 375 | 8 | 308 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 80 | 375 | 4 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-20 | 74 | 363 | 1 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-20 | 74 | 363 | 1 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-20 | 74 | 363 | 1 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |