| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_157.32 |
| Family | CBM43 |
| Protein Properties | Length: 469 Molecular Weight: 51854.3 Isoelectric Point: 6.5209 |
| Chromosome | Chromosome/Scaffold: 157 Start: 240284 End: 241979 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 380 | 459 | 7.2e-27 |
| WCVVVKGADVKELGSALDYACGEGEESCAALAPGKECYEPVSVTWHASYAFSSYWAQMRSRGANCYFNGLAEQTDEDPSK | |||
| GH17 | 29 | 353 | 0 |
| IGINYGRLGNNLPPPIQTIELIKSLKAGRVKLYDSNPEILNLLSATQIQVSIMVPNHQIIPISLNQNFADQWVQDNILTYYPETKIRIVLVGNEVLSYSA SDQDREIWYHLVPAMRRINKSMKAQGIKNIKVGTPLAMDVLSSTFPPSNGAFRSDIVDTVIIPLLHFLNGSNSFFFVDAYPYFPWSMNPTRANLDFALFK SNRTYTDPISGLKYTNLLDQMLDSVVFATAKLGYPSIRISISETGWPNAGDIDQVGANLQNAAVFNRNLIKKITADPPLGTPARPGEEIPTFIFSLFNEN QKSGPGTERHWGLLYPNGTHIYEVD | |||
| Full Sequence |
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| Protein Sequence Length: 469 Download |
| MPKLSSIDMG LALFLFSLLL VFSKASSKIG INYGRLGNNL PPPIQTIELI KSLKAGRVKL 60 YDSNPEILNL LSATQIQVSI MVPNHQIIPI SLNQNFADQW VQDNILTYYP ETKIRIVLVG 120 NEVLSYSASD QDREIWYHLV PAMRRINKSM KAQGIKNIKV GTPLAMDVLS STFPPSNGAF 180 RSDIVDTVII PLLHFLNGSN SFFFVDAYPY FPWSMNPTRA NLDFALFKSN RTYTDPISGL 240 KYTNLLDQML DSVVFATAKL GYPSIRISIS ETGWPNAGDI DQVGANLQNA AVFNRNLIKK 300 ITADPPLGTP ARPGEEIPTF IFSLFNENQK SGPGTERHWG LLYPNGTHIY EVDLTGKKET 360 REYQPLPAAK NDVPYKGKLW CVVVKGADVK ELGSALDYAC GEGEESCAAL APGKECYEPV 420 SVTWHASYAF SSYWAQMRSR GANCYFNGLA EQTDEDPSKA VEIAVSQV* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 2.0e-18 | 379 | 450 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 6.0e-30 | 379 | 458 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 7.0e-114 | 29 | 353 | 326 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM64490.1 | 0 | 26 | 457 | 34 | 464 | beta-1,3-glucanase, putative [Arabidopsis thaliana] |
| GenBank | ABK28569.1 | 0 | 26 | 457 | 34 | 464 | unknown [Arabidopsis thaliana] |
| EMBL | CBI39470.1 | 0 | 7 | 458 | 5 | 456 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_189019.1 | 0 | 26 | 457 | 34 | 464 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002298669.1 | 0 | 28 | 460 | 22 | 453 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 29 | 354 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 29 | 354 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 29 | 354 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_B | 0 | 29 | 355 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3ur8_A | 0 | 29 | 355 | 3 | 315 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX050550 | 278 | 149 | 426 | 0 |
| EX050461 | 272 | 179 | 450 | 0 |
| EX051579 | 275 | 183 | 457 | 0 |
| DT572251 | 306 | 113 | 417 | 0 |
| EX291357 | 340 | 104 | 441 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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