| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_157.42 |
| Family | GT47 |
| Protein Properties | Length: 656 Molecular Weight: 75065.9 Isoelectric Point: 7.4063 |
| Chromosome | Chromosome/Scaffold: 157 Start: 278551 End: 280948 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT47 | 233 | 576 | 0 |
| CFGRYIYIHDLPSRFNGDLLNNCRLLTRGTDKNMCPYLVNTGLGPKIEDTQMVLLNDSWFLTNQFLLEVIFHKKMKNYECLTKNSSLASAIFVPFYAGLD MSRFLWGFNISVRDSSARDLVGWLAKRPEWKTMWGRDHFLIGGRIAWDFRRQTDNESDWGSKLRFLPESLNMSMLSIESSSWNNDYAIPYPTCFHPSKDS EISEWQQRMRTFSRRFLFSFAGAPRPEYRDSIRGRIIDQCLAAKNHCKLLDCNYGATNCDNPVNVMKVFQSSVFCLQPPGDSYTRRSIFDSILAGCIPVF FHPGTAYAQYKWHLPKNHTKYSVYIPVRSINDWKIDITETLLGI | |||
| Full Sequence |
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| Protein Sequence Length: 656 Download |
| MIPTFLILLF PGLNLNHSAP TFVFCLLLVD VYSKELDAVR ILSVIKTPNQ RRNSRRCLIS 60 IAPEASVIEK DEEEDDPVHL LFCLYPTKAL LLRFQDKTQV SLRALSSSSW RDESNYIEAG 120 SSSFFLYVAL RLFSEAKITR TGARRGLMEK PIGGKCCNSH VWSVVLVSFV LCLILLCFDY 180 SALTGDNNGV PFSDTSYEKS LNTQNSFTHN LTKNSSIHTI SELPKNQNNV DDCFGRYIYI 240 HDLPSRFNGD LLNNCRLLTR GTDKNMCPYL VNTGLGPKIE DTQMVLLNDS WFLTNQFLLE 300 VIFHKKMKNY ECLTKNSSLA SAIFVPFYAG LDMSRFLWGF NISVRDSSAR DLVGWLAKRP 360 EWKTMWGRDH FLIGGRIAWD FRRQTDNESD WGSKLRFLPE SLNMSMLSIE SSSWNNDYAI 420 PYPTCFHPSK DSEISEWQQR MRTFSRRFLF SFAGAPRPEY RDSIRGRIID QCLAAKNHCK 480 LLDCNYGATN CDNPVNVMKV FQSSVFCLQP PGDSYTRRSI FDSILAGCIP VFFHPGTAYA 540 QYKWHLPKNH TKYSVYIPVR SINDWKIDIT ETLLGISEER LVGLREEVIK LIPGIVYARS 600 RLEKFEDAFD LAVKGILERI EMVRGVIREG KDPSVGFADG DDYKYTFSLY EEDEV* 660 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 1.0e-64 | 233 | 576 | 359 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB10178.1 | 0 | 148 | 655 | 1 | 480 | hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_193135.2 | 0 | 148 | 655 | 9 | 519 | exostosin family protein [Arabidopsis thaliana] |
| RefSeq | XP_002300146.1 | 0 | 147 | 650 | 6 | 515 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002321098.1 | 0 | 191 | 648 | 17 | 466 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532518.1 | 0 | 148 | 650 | 1 | 524 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| ES802449 | 322 | 336 | 650 | 0 |
| JK793974 | 237 | 310 | 546 | 0 |
| EY661612 | 257 | 369 | 623 | 0 |
| DV145943 | 263 | 285 | 544 | 0 |
| ES802449 | 82 | 301 | 378 | 3.4 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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