Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_166.31 |
Family | GH3 |
Protein Properties | Length: 818 Molecular Weight: 89557.3 Isoelectric Point: 5.7959 |
Chromosome | Chromosome/Scaffold: 166 Start: 246574 End: 249664 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 99 | 349 | 0 |
VPRLGLPKYEWWNEALHGVSSVGGGSRFDAVVPGATSFPTVILSTASFNEDLWKRIGQVISNEARAMYNLGRAGLTFWSPVINVVRDPRWGRIQETPGED PFVVGRYAANFVRGLQDVRGTEHVHDLNARPLKVSACCKHYAAYDVDNWKGIDRLHFDARVTEQDMVETFLKPFEMCVKEGDVSSIMCSYNRVNGIPTCA DPKLLNQTVRGDWGLHGYLVSDCDSIEVMVNKHQFINDTNEDAVAQTLKAG |
Full Sequence |
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Protein Sequence Length: 818 Download |
MGKIIEFMVY ASLGYSLFCL TCIVAEDFTM SDKLNDATPE PPLFTYVCDP AHLSAVKLDG 60 STLGFCDTSL PYSVRVEDLV DRLSVEEKVL LLGSTSPGVP RLGLPKYEWW NEALHGVSSV 120 GGGSRFDAVV PGATSFPTVI LSTASFNEDL WKRIGQVISN EARAMYNLGR AGLTFWSPVI 180 NVVRDPRWGR IQETPGEDPF VVGRYAANFV RGLQDVRGTE HVHDLNARPL KVSACCKHYA 240 AYDVDNWKGI DRLHFDARVT EQDMVETFLK PFEMCVKEGD VSSIMCSYNR VNGIPTCADP 300 KLLNQTVRGD WGLHGYLVSD CDSIEVMVNK HQFINDTNED AVAQTLKAGK LLIDGVNVTG 360 LDLDCGDFYP KFTMSSIRQG KVRVEDVDKA LRNLYMLMMR LGYFDGIPQF KNLGKKDICS 420 PSNIDLAAEA ARQGIVLLKN DNGTLPFDRN AVKNLAVVGP HATVTDVMIG NYAGDPCRYV 480 TPVDGFSTYT KVQTQQGCED VLCNNDKLIG AAVDAAKVAD ATVIVVGLNL KVEAESLDRL 540 NLFLPGFQTQ LINQVADAAK GPVVLIIMSA GGVDITFAKN NPKIKAIIWA GYPGQEGGRA 600 IADVVFGTYN PGGRLPITWY EGSYVEKLPM TSMQLRPVDD LSYPGRTYKF YNGTTVYPFG 660 YGLSYSQFTY KIQPLNLQSL KVKLTKLQHC HDIDYRPGAQ KPTCPSVKIE DGLACDTHYT 720 INTQIQITNT GTRDGDQVVI VYSKAPEGIL GAPIKQVIGF KRVGIRAGQT VTVPFQFNAC 780 KALSIVDYQA HAVLPAGQHS IIVGDGEASF TFDVDFT* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 5.0e-53 | 97 | 480 | 389 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-55 | 435 | 666 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 8.0e-61 | 97 | 397 | 305 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 5.0e-62 | 134 | 804 | 713 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 17 | 814 | 812 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002274591.1 | 0 | 15 | 816 | 7 | 802 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274619.1 | 0 | 34 | 812 | 36 | 797 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274651.1 | 0 | 1 | 816 | 1 | 807 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309869.1 | 0 | 78 | 816 | 2 | 693 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519718.1 | 0 | 31 | 817 | 32 | 802 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 134 | 804 | 91 | 722 | A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose |
PDB | 3u48_A | 0 | 134 | 804 | 91 | 722 | A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose |
PDB | 3u4a_B | 0 | 134 | 804 | 91 | 722 | A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose |
PDB | 3u4a_A | 0 | 134 | 804 | 91 | 722 | A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose |
PDB | 2x41_A | 7.00649e-44 | 75 | 804 | 3 | 699 | A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BX838810 | 335 | 45 | 379 | 0 |
GW867030 | 328 | 79 | 406 | 0 |
BX837031 | 324 | 45 | 368 | 0 |
DY932965 | 325 | 63 | 387 | 0 |
GW867097 | 337 | 78 | 414 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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