Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_17.124 |
Family | CBM43 |
Protein Properties | Length: 192 Molecular Weight: 19973.4 Isoelectric Point: 4.3039 |
Chromosome | Chromosome/Scaffold: 17 Start: 1580617 End: 1582106 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 102 | 180 | 3.3e-32 |
WCIASPTASPTALQVALDYACGYGGADCSALQPGASCFDPNNLRDHASYAFNDYYQKNPAPTSCVFGGTAQLTNTDPSK |
Full Sequence |
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Protein Sequence Length: 192 Download |
MASPLASCLA LFLLHLLINS GSSIAGKPSP EAIREQNELD GHRNRILISP LFTEDELDTA 60 PGNIPVVNPT TPVVNPTTPT VQPINPPAET TTPTPVTSGG QWCIASPTAS PTALQVALDY 120 ACGYGGADCS ALQPGASCFD PNNLRDHASY AFNDYYQKNP APTSCVFGGT AQLTNTDPSK 180 MNSATLVIVF S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 4.0e-21 | 101 | 171 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-35 | 101 | 179 | 80 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK94231.1 | 0 | 9 | 182 | 10 | 227 | unknown [Populus trichocarpa] |
EMBL | CBI30817.1 | 5.99756e-43 | 98 | 182 | 31 | 115 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002271903.1 | 0 | 1 | 182 | 1 | 210 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002331855.1 | 2.00386e-43 | 100 | 179 | 1 | 80 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519744.1 | 8.96831e-44 | 31 | 182 | 25 | 195 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.000000000000001 | 90 | 179 | 2 | 90 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX270033 | 162 | 21 | 182 | 0 |
EX293226 | 162 | 21 | 182 | 0 |
CN550472 | 85 | 98 | 182 | 7.9874e-44 |
JG727672 | 82 | 98 | 179 | 3.9937e-43 |
GE635169 | 84 | 99 | 182 | 1.00053e-42 |
Sequence Alignments (This image is cropped. Click for full image.) |
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