Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_18.25 |
Family | GH3 |
Protein Properties | Length: 774 Molecular Weight: 83355.9 Isoelectric Point: 7.9426 |
Chromosome | Chromosome/Scaffold: 18 Start: 157773 End: 161038 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 77 | 324 | 0 |
AAVPRLGIKGYEWWSEALHGVSNVGPGTKFGGAFPGATSFPQVITTAASFNASLWEEIGRVVSDEARAMYNGGMAGLTYWSPNVNIFRDPRWGRGQETPG EDPVLAGKYAASYVKGLQGDDGNRLKVAACCKHFTAYDLDNWNGVDRFHFNAKVSKQDIEDTFDVPFRMCVKEGKVASVMCSYNQVNGVPTCADPNLLRK TVRGVWNLNGYIVSDCDSVGVFYENQHYTSTPEEAAADAIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 774 Download |
MACGSSAHTS SFLTLLFLFL SGVLVRGRDP FGCDPTDKTT NNLPFCRTSA LISERVNDLI 60 GRLTLQEKVR LLVNNAAAVP RLGIKGYEWW SEALHGVSNV GPGTKFGGAF PGATSFPQVI 120 TTAASFNASL WEEIGRVVSD EARAMYNGGM AGLTYWSPNV NIFRDPRWGR GQETPGEDPV 180 LAGKYAASYV KGLQGDDGNR LKVAACCKHF TAYDLDNWNG VDRFHFNAKV SKQDIEDTFD 240 VPFRMCVKEG KVASVMCSYN QVNGVPTCAD PNLLRKTVRG VWNLNGYIVS DCDSVGVFYE 300 NQHYTSTPEE AAADAIKAGL DLDCGPFLAE HTEDAVKQGL LGEAEINNAL SNTLTVQMRL 360 GMFDGTPSAH AYGKLGPRDV CTLAHKELAL EAARQGIVLL KNHGSSLPLS HRRHRTIAVI 420 GPNSNATVTM IGNYAGVACE YTSPIQGIGK YAKVIHQMGC GNVACGDENL FDEAIDSARQ 480 ADATVLVMGL DQSIEAEFKD RTELVLPGHQ QDLISEVSKA SKGPTILVLM SGGPVDLSFV 540 KNDKLISAIL WVGYPGQAGG AAIADILYGE TNPGGKLPMT WYPQEYIKNL AMTEMAMRSS 600 PSKGYPGRTY RFYKGPVVYP FGYGLSYSNF VHTIANAPTV LSIHLHGRHG SQNGTVSGKA 660 IRVTHAKCSG LSLGVQVEVK NTGSKDGSHT LLVFSTPPAG HWAPEKQLVG FEKVQVAAGG 720 RRVVEMNIHV CKYLSVVDRS GIRRIPLGEH HLHIGGIKHR VSLQAATLGI IKS* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 8.0e-59 | 74 | 460 | 393 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-63 | 397 | 628 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 3.0e-65 | 59 | 356 | 305 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 2.0e-91 | 114 | 728 | 669 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 28 | 765 | 761 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG10624.1 | 0 | 11 | 773 | 2 | 763 | AC022521_2 Similar to xylosidase [Arabidopsis thaliana] |
RefSeq | NP_563659.1 | 0 | 8 | 773 | 4 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270249.1 | 0 | 5 | 773 | 3 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002316021.1 | 0 | 24 | 773 | 21 | 768 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515300.1 | 0 | 29 | 773 | 26 | 768 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 114 | 728 | 91 | 696 | A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2 |
PDB | 3u48_A | 0 | 114 | 728 | 91 | 696 | A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2 |
PDB | 3u4a_B | 0 | 114 | 728 | 91 | 696 | A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2 |
PDB | 3u4a_A | 0 | 114 | 728 | 91 | 696 | A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2 |
PDB | 2x41_A | 0 | 54 | 764 | 2 | 708 | A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BX838810 | 316 | 23 | 338 | 0 |
GW867030 | 307 | 59 | 365 | 0 |
DY291330 | 352 | 420 | 771 | 0 |
BX837031 | 330 | 23 | 352 | 0 |
GW867097 | 308 | 58 | 365 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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