y
Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_18.253 |
Family | GH14 |
Protein Properties | Length: 505 Molecular Weight: 56945.4 Isoelectric Point: 5.9469 |
Chromosome | Chromosome/Scaffold: 18 Start: 2696413 End: 2700589 |
Description | beta-amylase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 81 | 493 | 0 |
LGVIDMKCELVDPEVLLHQLRILKKINVDGIMVDCWWGIVEAHTPQVYDWSGYKRLFQIVRDQGLKIQVVMSFHECGGNVGDDIHIPLPQWVREIGQSNP DIYFTDREGRHNSECLTWGIDKERVLRGRTAVEVYFDYMRSFRVEFDEFFDGGIISEIEVGLGPCGELRYPSYPAKHGWRYPGIGEFQCYDKYLMKSLSK AAEVRGHSFWARGPDNAGSYNSSPHETGFFRDGGDYDSYYGRFFLNWYSQVLIDHGDRVLGLANLAFEGSYIAAKLSGIHWWYKTASHAAELTAGFYNPS NRDGYAAIAAMLKKHEVAMNFTCVELRTLDQHEDFPEALADPEGLVWQVLNAAWDVNILVASENALPCYDREGYNKILENAKPLNDPDGRHLSAFTYLRL SPVLMESHNFKEF |
Full Sequence |
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Protein Sequence Length: 505 Download |
MAISSMQLFQ VLKPPNVSLL PSVTMSGFGS TSGRKYCGLK GGFMVSSTRT RVLALVSDRG 60 EGTQDHPALG GAMDTTDEKQ LGVIDMKCEL VDPEVLLHQL RILKKINVDG IMVDCWWGIV 120 EAHTPQVYDW SGYKRLFQIV RDQGLKIQVV MSFHECGGNV GDDIHIPLPQ WVREIGQSNP 180 DIYFTDREGR HNSECLTWGI DKERVLRGRT AVEVYFDYMR SFRVEFDEFF DGGIISEIEV 240 GLGPCGELRY PSYPAKHGWR YPGIGEFQCY DKYLMKSLSK AAEVRGHSFW ARGPDNAGSY 300 NSSPHETGFF RDGGDYDSYY GRFFLNWYSQ VLIDHGDRVL GLANLAFEGS YIAAKLSGIH 360 WWYKTASHAA ELTAGFYNPS NRDGYAAIAA MLKKHEVAMN FTCVELRTLD QHEDFPEALA 420 DPEGLVWQVL NAAWDVNILV ASENALPCYD REGYNKILEN AKPLNDPDGR HLSAFTYLRL 480 SPVLMESHNF KEFERFVKRM HGTG* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 3.0e-149 | 100 | 500 | 409 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 6.0e-163 | 81 | 500 | 424 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 4 | 502 | 533 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 82 | 502 | 421 | + beta-amylase | ||
PLN02801 | PLN02801 | 0 | 80 | 501 | 428 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC13634.1 | 0 | 40 | 502 | 36 | 509 | similar to the family of glycosyl hydrolases [Arabidopsis thaliana] |
EMBL | CBI40370.1 | 0 | 12 | 502 | 26 | 540 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274612.1 | 0 | 12 | 502 | 26 | 566 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320794.1 | 0 | 81 | 502 | 16 | 437 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511858.1 | 0 | 1 | 502 | 1 | 533 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2xgi_A | 0 | 96 | 503 | 33 | 442 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 2xgb_A | 0 | 96 | 503 | 33 | 442 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 2xg9_A | 0 | 96 | 503 | 33 | 442 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 2xfy_A | 0 | 96 | 503 | 33 | 442 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 2xfr_A | 0 | 96 | 503 | 33 | 442 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV021150 | 292 | 158 | 449 | 0 |
DV466053 | 270 | 233 | 502 | 0 |
GR933701 | 264 | 159 | 422 | 0 |
CO447286 | 289 | 150 | 438 | 0 |
GO367915 | 286 | 84 | 369 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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