Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_19.130 |
Family | GH85 |
Protein Properties | Length: 331 Molecular Weight: 37227.3 Isoelectric Point: 5.0091 |
Chromosome | Chromosome/Scaffold: 19 Start: 846259 End: 850279 |
Description | Glycosyl hydrolase family 85 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH85 | 68 | 203 | 1.79366e-43 |
MQGGYGDDKWIQGGQNASGFALWHWYLMDVFVYFSHSLVTLPPPCWTNTAHRHGVKVLGTFITEWEEGTIICNTLLESKESAQMYAERLAELAVALGFDG WLLNLKNKLDAEQVPNLGEFVSHLTKTMHSSVPGSM |
Full Sequence |
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Protein Sequence Length: 331 Download |
MSIPSDDPPA FDPLEPSVPI SYPIKTLEEL ASRSYFDSFH YPFNKSSVPL EMNQFLPDRP 60 RILVCHDMQG GYGDDKWIQG GQNASGFALW HWYLMDVFVY FSHSLVTLPP PCWTNTAHRH 120 GVKVLGTFIT EWEEGTIICN TLLESKESAQ MYAERLAELA VALGFDGWLL NLKNKLDAEQ 180 VPNLGEFVSH LTKTMHSSVP GSMTHVALDV LKKDNVSAAL FAPGWIYETD QPPDFQTAQN 240 KWWSLVEKSW GTLQTYPKML PFYSNFDQGH GFHISSEGSQ VSDVPWDNIS CQGLQPFLEF 300 NDKPAQDPIQ VLVKLTSILC TLRVKGRAIL * |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
COG4724 | COG4724 | 8.0e-7 | 43 | 204 | 181 | + Endo-beta-N-acetylglucosaminidase D [Carbohydrate transport and metabolism] |
pfam03644 | Glyco_hydro_85 | 2.0e-12 | 204 | 271 | 83 | + Glycosyl hydrolase family 85. Family of endo-beta-N-acetylglucosaminidases. These enzymes work on a broad spectrum of substrates. |
cd06547 | GH85_ENGase | 5.0e-20 | 201 | 296 | 111 | + Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins. The beta-1,4-glycosyl bond located between two N-acetylglucosamine residues is hydrolyzed such that N-acetylglucosamine 1 remains with the protein and N-acetylglucosamine 2 forms the reducing end of the released glycan. ENGase is a key enzyme in the processing of free oligosaccharides in the cytosol of eukaryotes. Oligosaccharides formed in the lumen of the endoplasmic reticulum are transported into the cytosol where they are catabolized by cytosolic ENGases and other enzymes, possibly to maximize the reutilization of the component sugars. ENGases have an eight-stranded alpha/beta barrel topology and are classified as a family 85 glycosyl hydrolase (GH85) domain. The GH85 ENGases are sequence-similar to the family 18 glycosyl hydrolases, also known as GH18 chitinases. An ENGase-like protein is also found in bacteria and is included in this alignment model. |
pfam03644 | Glyco_hydro_85 | 3.0e-56 | 68 | 204 | 144 | + Glycosyl hydrolase family 85. Family of endo-beta-N-acetylglucosaminidases. These enzymes work on a broad spectrum of substrates. |
cd06547 | GH85_ENGase | 5.0e-57 | 63 | 202 | 142 | + Endo-beta-N-acetylglucosaminidase (ENGase) hydrolyzes the N-N'-diacetylchitobiosyl core of N-glycosylproteins. The beta-1,4-glycosyl bond located between two N-acetylglucosamine residues is hydrolyzed such that N-acetylglucosamine 1 remains with the protein and N-acetylglucosamine 2 forms the reducing end of the released glycan. ENGase is a key enzyme in the processing of free oligosaccharides in the cytosol of eukaryotes. Oligosaccharides formed in the lumen of the endoplasmic reticulum are transported into the cytosol where they are catabolized by cytosolic ENGases and other enzymes, possibly to maximize the reutilization of the component sugars. ENGases have an eight-stranded alpha/beta barrel topology and are classified as a family 85 glycosyl hydrolase (GH85) domain. The GH85 ENGases are sequence-similar to the family 18 glycosyl hydrolases, also known as GH18 chitinases. An ENGase-like protein is also found in bacteria and is included in this alignment model. |
Gene Ontology | |
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GO Term | Description |
GO:0005737 | cytoplasm |
GO:0033925 | mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002273683.1 | 0 | 5 | 204 | 10 | 208 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002273683.1 | 4.2039e-45 | 204 | 314 | 284 | 393 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002315138.1 | 0 | 6 | 204 | 16 | 213 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520781.1 | 0 | 7 | 204 | 15 | 213 | endo beta n-acetylglucosaminidase, putative [Ricinus communis] |
RefSeq | XP_002520781.1 | 0 | 204 | 315 | 289 | 400 | endo beta n-acetylglucosaminidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2w92_A | 0.0007 | 80 | 186 | 76 | 181 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
PDB | 2w91_A | 0.0007 | 80 | 186 | 76 | 181 | A Chain A, Structure Of A Streptococcus Pneumoniae Family 85 Glycoside Hydrolase, Endo-D. |
PDB | 3fhq_F | 0.0008 | 42 | 175 | 28 | 175 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
PDB | 3fhq_D | 0.0008 | 42 | 175 | 28 | 175 | A Chain A, Structure Of Endo-Beta-N-Acetylglucosaminidase A |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY268779 | 201 | 7 | 203 | 0 |
GW828351 | 204 | 4 | 204 | 0 |
GD113095 | 196 | 12 | 204 | 0 |
FE899038 | 191 | 15 | 203 | 0 |
FS092498 | 193 | 15 | 204 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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