| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_1973.3 |
| Family | CE8 |
| Protein Properties | Length: 351 Molecular Weight: 39086.4 Isoelectric Point: 8.8513 |
| Chromosome | Chromosome/Scaffold: 1973 Start: 8628 End: 10064 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 51 | 335 | 0 |
| RVDINGDGDFRSIQEAINAVPDGNSEWVIIHIRKGIYREKVHIPKSKQYIFMRGNGKGRTSIVWSESSHDNVASATFRLEASHFIAFGISFKNEAPTGVA FTSQNQSVAAFVGADKAAFYHCAFYSNHNTLFDNKGRHYYESCYIQGSIDFIFGRATSIFHSCEIFVISDKRVKPYGSITAQNREKEDEKSGFVFVKGKV YGIDLVYLGRAKGAFSRVIFAKTYLSKTIVPHGWTNWSFDGTTEKLFHAEYKCHGPGAESAGRAPWSKQLTKEEVAPFLSISFIN | |||
| Full Sequence |
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| Protein Sequence Length: 351 Download |
| MPSSHLLVAS ATILLFLVSF LGQTCSSSAA YDLLIDAPLL TEKIKTNRTI RVDINGDGDF 60 RSIQEAINAV PDGNSEWVII HIRKGIYREK VHIPKSKQYI FMRGNGKGRT SIVWSESSHD 120 NVASATFRLE ASHFIAFGIS FKNEAPTGVA FTSQNQSVAA FVGADKAAFY HCAFYSNHNT 180 LFDNKGRHYY ESCYIQGSID FIFGRATSIF HSCEIFVISD KRVKPYGSIT AQNREKEDEK 240 SGFVFVKGKV YGIDLVYLGR AKGAFSRVIF AKTYLSKTIV PHGWTNWSFD GTTEKLFHAE 300 YKCHGPGAES AGRAPWSKQL TKEEVAPFLS ISFINGNQWL PVWQAEELTI * 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02497 | PLN02497 | 3.0e-90 | 48 | 340 | 297 | + probable pectinesterase | ||
| PLN02665 | PLN02665 | 8.0e-91 | 48 | 340 | 296 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 3.0e-93 | 50 | 340 | 291 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 1.0e-103 | 43 | 341 | 310 | + pectinesterase family protein | ||
| PLN02480 | PLN02480 | 0 | 2 | 344 | 343 | + Probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU23222.1 | 0 | 3 | 343 | 9 | 345 | unknown [Glycine max] |
| RefSeq | NP_188331.1 | 0 | 13 | 348 | 9 | 344 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002272939.1 | 0 | 34 | 343 | 38 | 347 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311381.1 | 0 | 11 | 344 | 12 | 342 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523016.1 | 0 | 19 | 343 | 28 | 349 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 1.4013e-45 | 50 | 340 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1e-38 | 55 | 340 | 10 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 0.0000000000004 | 47 | 328 | 32 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 1qjv_B | 0.0000000000006 | 60 | 342 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.0000000000006 | 60 | 342 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GR458872 | 284 | 53 | 336 | 0 |
| ES902377 | 275 | 67 | 341 | 0 |
| DY022435 | 264 | 46 | 309 | 0 |
| DK467117 | 290 | 9 | 298 | 0 |
| CO115605 | 290 | 8 | 297 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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