Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_2.377 |
Family | CBM43 |
Protein Properties | Length: 197 Molecular Weight: 21624.2 Isoelectric Point: 6.2166 |
Chromosome | Chromosome/Scaffold: 2 Start: 4196633 End: 4197223 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 78 | 157 | 2.6e-25 |
WCVVNNNMDLSNASTRALELCSAADCTALSPGGSCSNISWPGNISYAFNNYYQQHDQRADSCDFGGLGLITAVDPSSGTC |
Full Sequence |
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Protein Sequence Length: 197 Download |
MDHLSSKSGT PLRPRRPPIE TYIFSLLDED QRSIATGNFE RHWGVFTFDG QAKYHFSFGQ 60 GSKNLVNAQN VEYLSSRWCV VNNNMDLSNA STRALELCSA ADCTALSPGG SCSNISWPGN 120 ISYAFNNYYQ QHDQRADSCD FGGLGLITAV DPSSGTCRFA VELLTSHSSP PMQFYVFHSI 180 MTLTLNVLLC LLISSS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 7.0e-11 | 7 | 58 | 52 | + Glycosyl hydrolases family 17. | ||
pfam07983 | X8 | 9.0e-14 | 77 | 145 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 9.0e-28 | 78 | 159 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28434.1 | 0 | 1 | 191 | 291 | 481 | unnamed protein product [Vitis vinifera] |
GenBank | EEC75052.1 | 0 | 1 | 192 | 136 | 320 | hypothetical protein OsI_11162 [Oryza sativa Indica Group] |
RefSeq | XP_002269108.1 | 0 | 1 | 188 | 294 | 481 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313970.1 | 0 | 1 | 189 | 288 | 476 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515703.1 | 0 | 1 | 192 | 201 | 392 | Glucan endo-1,3-beta-glucosidase, acidic isoform PR-O, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4gzj_A | 0.000009 | 1 | 58 | 260 | 314 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 4gzi_A | 0.000009 | 1 | 58 | 260 | 314 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |
PDB | 3ur8_B | 0.000009 | 1 | 58 | 260 | 314 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |
PDB | 3ur8_A | 0.000009 | 1 | 58 | 260 | 314 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |
PDB | 3ur7_B | 0.000009 | 1 | 58 | 260 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |