Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_20.222 |
Family | GH5 |
Protein Properties | Length: 475 Molecular Weight: 53100.5 Isoelectric Point: 4.8745 |
Chromosome | Chromosome/Scaffold: 20 Start: 2351900 End: 2354398 |
Description | |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 162 | 465 | 7.56701e-44 |
SANGFFVQVKSENVLTADYSGSSWDDNDPSVFIMTILESTRLRGNGVNAVRIPVGWWIAHDPSPPKPFVGGSLQVLDNAFKWAQNNGMKVIIDLHAPKSS QNGEQHSASRDGYLEWGESSAVETVAVIDFLAEKYGRHPSLAAIELMNEPVAPGVDLDALKNYYKAGYEAVRKYTSDAYVIFSNRLGRADPKELLEFAAT FDRVVIDVHYYNLFSPVFKNKNVQENIDYIYNQRASDLNTIMTSNGPLIFVGEWTGEFDANEEKSMEDYQNFSKAQVDVYGRASFGWGYWSYRCESENRW SLQW |
Full Sequence |
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Protein Sequence Length: 475 Download |
MSHCSFITLL FPLLLLSWIP SLSLSQTTNP TLPLRAVNLG NWLVTEGWMN SSLFDGIPNN 60 DLLDGTQVQF MSAGLLNYLS AENGGGTVVV ANRPSASGWE TFRLWRMNET YFNFRVFNKQ 120 FVGIKNGGQG ANVVAVSNGA GDAETFQIVR KDGDGSRVRI RSANGFFVQV KSENVLTADY 180 SGSSWDDNDP SVFIMTILES TRLRGNGVNA VRIPVGWWIA HDPSPPKPFV GGSLQVLDNA 240 FKWAQNNGMK VIIDLHAPKS SQNGEQHSAS RDGYLEWGES SAVETVAVID FLAEKYGRHP 300 SLAAIELMNE PVAPGVDLDA LKNYYKAGYE AVRKYTSDAY VIFSNRLGRA DPKELLEFAA 360 TFDRVVIDVH YYNLFSPVFK NKNVQENIDY IYNQRASDLN TIMTSNGPLI FVGEWTGEFD 420 ANEEKSMEDY QNFSKAQVDV YGRASFGWGY WSYRCESENR WSLQWMLQNN YINL* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00257 | Fascin | 0.0002 | 78 | 179 | 102 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
pfam00150 | Cellulase | 8.0e-19 | 201 | 453 | 265 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 2.0e-20 | 206 | 465 | 303 | + Endoglucanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN74231.1 | 0 | 28 | 474 | 137 | 607 | hypothetical protein [Vitis vinifera] |
EMBL | CBI18831.1 | 0 | 1 | 474 | 1 | 505 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33033.1 | 0 | 1 | 474 | 1 | 505 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33035.1 | 0 | 1 | 454 | 1 | 486 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002306319.1 | 0 | 35 | 472 | 1 | 481 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1eqp_A | 2e-25 | 207 | 469 | 81 | 375 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 1eqc_A | 2e-25 | 207 | 469 | 81 | 375 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 1cz1_A | 2e-25 | 207 | 469 | 81 | 375 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
PDB | 2pc8_A | 2e-25 | 207 | 469 | 87 | 381 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
PDB | 2pbo_A | 2e-25 | 207 | 469 | 87 | 381 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX263924 | 330 | 135 | 421 | 0 |
DC898905 | 378 | 130 | 474 | 0 |
CX664525 | 327 | 47 | 340 | 0 |
CX666375 | 272 | 203 | 474 | 0 |
DC899299 | 272 | 203 | 474 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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