Basic Information | |
---|---|
Species | Carica papaya |
Cazyme ID | evm.model.supercontig_209.11 |
Family | CBM43 |
Protein Properties | Length: 172 Molecular Weight: 18506.7 Isoelectric Point: 4.3622 |
Chromosome | Chromosome/Scaffold: 209 Start: 51806 End: 53048 |
Description | plasmodesmata callose-binding protein 5 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 33 | 116 | 1.9e-32 |
WCVAKNNAEDAALQGAIDWACGEGGADCGPIQKGGPCYDPTDIQTTASFAFNDYYLKHGLTDDACYFQNTAALTSLNPSHGNCK |
Full Sequence |
---|
Protein Sequence Length: 172 Download |
MFSVLSFWLF IFSLVSPQTV TAQNGVVVQT EVWCVAKNNA EDAALQGAID WACGEGGADC 60 GPIQKGGPCY DPTDIQTTAS FAFNDYYLKH GLTDDACYFQ NTAALTSLNP SHGNCKFPSS 120 KTMSNGTISG SPTIIDMQPH TSDFSGCNHI SSSWFWTWII GVTITRTILL D* 180 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 7.0e-19 | 33 | 103 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-36 | 33 | 117 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM67357.1 | 0 | 21 | 167 | 69 | 214 | unknown [Arabidopsis thaliana] |
RefSeq | NP_567060.1 | 0 | 21 | 167 | 28 | 174 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding [Arabidopsis thaliana] |
RefSeq | XP_002279275.1 | 0 | 22 | 170 | 26 | 173 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326029.1 | 0 | 1 | 149 | 1 | 152 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525141.1 | 0 | 23 | 151 | 23 | 153 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 5e-19 | 33 | 119 | 13 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EX286256 | 172 | 1 | 172 | 0 |
GE634972 | 136 | 23 | 156 | 0 |
CU548740 | 134 | 27 | 160 | 0 |
DW507019 | 165 | 5 | 169 | 0 |
CU535479 | 130 | 28 | 157 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|