Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_23.56 |
Family | AA5 |
Protein Properties | Length: 603 Molecular Weight: 66603.7 Isoelectric Point: 9.3843 |
Chromosome | Chromosome/Scaffold: 23 Start: 617722 End: 619732 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 72 | 601 | 0 |
RDSSSVKTDYLGKWELFSRNSGVSAMHAILLPVINKVLMYDATIWRISQIKLPPGKRCHIVKQATGKKDCWAHAVLLDINTAALKPLMLDTDTWCSSGGL SVNGTLVGTGGFQGGANTVRYLGICDNCDWVEYPNALAAPRWYSTQATLGDGSFIVVGGRAAMSYEFIPAEGTKNTKIFQSKLLQETTDKSENNLYPFVY LSTDGNVFIFANDRSILLNPRTNQVIKQYPVLPGGARNYPGSGMSALLPIRLFQQNPAVINAEVLVCGGAPHNAYELAGHKVFGPALRDCGRISITHQNP RWKIEMMPTPRVMGDAMILPNGDVLLLNGAKQGSAGWHYAKEPNLNPVLYMTHAKRGYRFRELAASNIPRMYHSSSVLLPDGQVLIAGSNTNDGYVYNTE YPTEMRVEKFSPPYLDPKLRKLRPDIIKFSMPKRISYGNRFHLQIRSRESDVSKDNIMITMYSPAFTTHGISMNQRLLILGLSDVLPNIVPRVHGITAVA PPSGNIAPPGYYILFVVYRGVPSVGEWVQI |
Full Sequence |
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Protein Sequence Length: 603 Download |
MSIWRPLSVL PLLFISAIAQ FSFEFSGHHD VKPKVSLSAD IHDLPNVLDF FPEHREDILG 60 DEAAATKGGR KRDSSSVKTD YLGKWELFSR NSGVSAMHAI LLPVINKVLM YDATIWRISQ 120 IKLPPGKRCH IVKQATGKKD CWAHAVLLDI NTAALKPLML DTDTWCSSGG LSVNGTLVGT 180 GGFQGGANTV RYLGICDNCD WVEYPNALAA PRWYSTQATL GDGSFIVVGG RAAMSYEFIP 240 AEGTKNTKIF QSKLLQETTD KSENNLYPFV YLSTDGNVFI FANDRSILLN PRTNQVIKQY 300 PVLPGGARNY PGSGMSALLP IRLFQQNPAV INAEVLVCGG APHNAYELAG HKVFGPALRD 360 CGRISITHQN PRWKIEMMPT PRVMGDAMIL PNGDVLLLNG AKQGSAGWHY AKEPNLNPVL 420 YMTHAKRGYR FRELAASNIP RMYHSSSVLL PDGQVLIAGS NTNDGYVYNT EYPTEMRVEK 480 FSPPYLDPKL RKLRPDIIKF SMPKRISYGN RFHLQIRSRE SDVSKDNIMI TMYSPAFTTH 540 GISMNQRLLI LGLSDVLPNI VPRVHGITAV APPSGNIAPP GYYILFVVYR GVPSVGEWVQ 600 IL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 3.0e-25 | 494 | 601 | 109 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 7.0e-27 | 491 | 601 | 112 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 1.0e-105 | 97 | 340 | 248 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL84955.1 | 0 | 59 | 602 | 56 | 594 | AT5g19580/T20D1_100 [Arabidopsis thaliana] |
RefSeq | NP_176897.1 | 0 | 78 | 602 | 91 | 615 | glyoxal oxidase-related [Arabidopsis thaliana] |
RefSeq | NP_197459.1 | 0 | 59 | 602 | 56 | 594 | glyoxal oxidase-related [Arabidopsis thaliana] |
RefSeq | XP_002324431.1 | 0 | 83 | 601 | 2 | 521 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331167.1 | 0 | 3 | 601 | 4 | 608 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2wq8_A | 0.00000000003 | 163 | 601 | 247 | 659 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
PDB | 2eic_A | 0.00000000004 | 163 | 601 | 225 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 2eid_A | 0.00000000007 | 163 | 601 | 225 | 637 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 2eib_A | 0.00000000009 | 163 | 601 | 225 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2vz3_A | 0.0000000001 | 163 | 601 | 225 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CX195479 | 287 | 265 | 551 | 0 |
DK501335 | 275 | 187 | 461 | 0 |
GR459933 | 281 | 226 | 506 | 0 |
GR461224 | 286 | 273 | 558 | 0 |
GR458911 | 277 | 140 | 416 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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