Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_24.26 |
Family | GH35 |
Protein Properties | Length: 818 Molecular Weight: 90461.4 Isoelectric Point: 8.2096 |
Chromosome | Chromosome/Scaffold: 24 Start: 688012 End: 692849 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 33 | 335 | 0 |
IIDGQRRIILSGAIHYPRSTPQMWPDLIQKAKNGGLDAIETYIFWNVHEPRRREYDFTGNLDFVKFFQLIQQAGLYGILRIGPYACAEWTYGGFPVWLHN IPGIEFRTNNEIYKNEMQIFTTKIVNLCKEAKLFASQGGPIILAQIENEYGNIMGPYGGAGVAYMNWCAEMAIAQNIGVPWIMCQQDNAPRSVINTCNGY YCDSFNPNNPKSPKMWTENWIGWFKKWGERDPHRTAEDTAFAVARFFQRGGVLQNYYMYHGGTNFGLTAGGPLITTSYDYDAPLDEYGNLNQPKWGHLKQ LHA |
Full Sequence |
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Protein Sequence Length: 818 Download |
MSRFFIVLLA ISFSFLCSSS SAIQIDYDAN AVIIDGQRRI ILSGAIHYPR STPQMWPDLI 60 QKAKNGGLDA IETYIFWNVH EPRRREYDFT GNLDFVKFFQ LIQQAGLYGI LRIGPYACAE 120 WTYGGFPVWL HNIPGIEFRT NNEIYKNEMQ IFTTKIVNLC KEAKLFASQG GPIILAQIEN 180 EYGNIMGPYG GAGVAYMNWC AEMAIAQNIG VPWIMCQQDN APRSVINTCN GYYCDSFNPN 240 NPKSPKMWTE NWIGWFKKWG ERDPHRTAED TAFAVARFFQ RGGVLQNYYM YHGGTNFGLT 300 AGGPLITTSY DYDAPLDEYG NLNQPKWGHL KQLHAALKLG EKIITNGVQT TKNLGNGVDL 360 TTYTNNATGE RFCYLSNIDG SKDANIDLQQ EGKYFVPAWS VSILEGCNKE IYNTAKVNVQ 420 TSIMVKKPLT ATASWSWTPE IMKDTLHGKG NFTASKLLDQ KQASSESSDY LWYTTSFNIN 480 AKTKNAILSV NSSGEVLHAY VNKKLIGDQM GNTFQFQKPI SLKHPKNTIT LLSVTVGLQN 540 YGSFFDVQPN GISGGPVKLI DAKTNATLLD LSSNLWTYKI GLNGEAKRLF DPNSKKAKGH 600 AWFTTKQVPK GRPMTWYKTS FKVPQYTDPV VVDLQGMGKG HAWVNGNSLG RFWLTQIADL 660 NGCSATCDYR GGYSANKCVS NCGNPSQRWY HVPRSFLNNG DNTLVLFEEF GGDPSNVSFQ 720 TITVGTVCGN AYEGSTLELS CQGGSKIMGI EFASFGDHHE LCGSFSKGSS EAINTLSIVQ 780 KVCVGKGICS IEVSDKTFGG NNATSSDRRL AVQAVCS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 1.0e-6 | 47 | 183 | 155 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 6.0e-10 | 739 | 816 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 2.0e-23 | 25 | 327 | 366 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-159 | 33 | 337 | 320 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 25 | 817 | 823 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAJ09953.1 | 0 | 8 | 816 | 7 | 827 | beta-galactosidase [Mangifera indica] |
EMBL | CBI27773.1 | 0 | 7 | 816 | 22 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002324727.1 | 0 | 55 | 782 | 1 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326135.1 | 0 | 7 | 817 | 8 | 824 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516237.1 | 0 | 8 | 816 | 7 | 825 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 30 | 333 | 13 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3.99931e-42 | 18 | 324 | 4 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3.99931e-42 | 18 | 324 | 4 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 3.99931e-42 | 18 | 324 | 4 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO778160 | 714 | 25 | 726 | 0 |
DY264749 | 353 | 174 | 523 | 0 |
HO780602 | 659 | 75 | 719 | 0 |
FC915116 | 305 | 174 | 476 | 0 |
DY280097 | 340 | 24 | 362 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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