| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_25.193 |
| Family | CE8 |
| Protein Properties | Length: 588 Molecular Weight: 64314.1 Isoelectric Point: 7.0359 |
| Chromosome | Chromosome/Scaffold: 25 Start: 2032667 End: 2035587 |
| Description | pectin methylesterase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 279 | 571 | 0 |
| NVTVAQDGSGNFTTVKEAVNAVPKKSVSRFVIYVKAGKYVENVILDKNKWHVMMYGDGSSKTIISGSLNFMDGTPTYATATVAVQGKGFIARDIKFINEA GAAKHQAVAFRSGSDLSVFHRCSFDGFQDTLYAHSNRQFYRECDITGTIDFIFGNAAVVFQNCNIQPRQPMPRQFNTITAQGKKDPNQNTGISIHKCIIS ALDTVTAPTYLGRPWKDFSTTVVMQTEIGSILNPVGWMSWVANVDPPSTILYGEYRNTGLGSAVEKRVKWAGYKPALTDNEAGKFTVGTFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 588 Download |
| MDTINSFKGY GKVDPAEEQA FHRKTRKRLI ILIVSSIVLV AVIIGAVVGV LVHKRNNESK 60 PSSGFTPAAS LKTVCSATLY PDSCYSSISS LESSNSTDPE IIFRYSIQVA LDELSKLTGL 120 PSKLKDAAKD PRLGAALDVC ETLFEDALDH LNDSISSMKV DEGEKLLSPL KVDGIRTWLS 180 TSVTDQEACL DALEELKQNS SKYENSEEIK QLKSIMKNST EFSSNSLAIA SKIMGLLADF 240 NIPIHRRLMG LEVSSDSGFP SWVSHGDRRL LQESNPVPNV TVAQDGSGNF TTVKEAVNAV 300 PKKSVSRFVI YVKAGKYVEN VILDKNKWHV MMYGDGSSKT IISGSLNFMD GTPTYATATV 360 AVQGKGFIAR DIKFINEAGA AKHQAVAFRS GSDLSVFHRC SFDGFQDTLY AHSNRQFYRE 420 CDITGTIDFI FGNAAVVFQN CNIQPRQPMP RQFNTITAQG KKDPNQNTGI SIHKCIISAL 480 DTVTAPTYLG RPWKDFSTTV VMQTEIGSIL NPVGWMSWVA NVDPPSTILY GEYRNTGLGS 540 AVEKRVKWAG YKPALTDNEA GKFTVGTFIQ GADWLPETNV LYDATLI* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 8.0e-154 | 57 | 586 | 543 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 7.0e-155 | 71 | 575 | 521 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 0 | 1 | 586 | 588 | + pectinesterase | ||
| PLN02468 | PLN02468 | 0 | 7 | 586 | 588 | + putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 279 | 571 | 298 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM65650.1 | 0 | 1 | 581 | 1 | 582 | pectinesterase, putative [Arabidopsis thaliana] |
| RefSeq | NP_175787.1 | 0 | 1 | 581 | 1 | 582 | ATPME1; pectinesterase [Arabidopsis thaliana] |
| RefSeq | XP_002265217.1 | 0 | 1 | 586 | 1 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304256.1 | 0 | 1 | 586 | 1 | 588 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002532945.1 | 0 | 1 | 586 | 1 | 589 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 273 | 586 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 277 | 582 | 2 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 6e-21 | 290 | 576 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 6e-21 | 290 | 576 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 2e-20 | 290 | 576 | 18 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
