| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_25.57 |
| Family | GH35 |
| Protein Properties | Length: 836 Molecular Weight: 92385.3 Isoelectric Point: 8.435 |
| Chromosome | Chromosome/Scaffold: 25 Start: 728712 End: 736620 |
| Description | beta galactosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 29 | 331 | 0 |
| TINGKRRILLSGSIHYPRSTPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSPGKYYFGGNYDLVRFIKLVKQAGLYVHLRIGPYVCAEWNFGGFPVWLKY IPGIAFRTNNGPFKAYMQRFTKKIVDMMKAEGLFESQGGPIILSQIENEYGPMEYELGAAGRAYSQWAAQMAVGLGTGVPWVMCKQDDAPDPIINSCNGF YCDYFSPNKAYKPKMWTEAWTGWFTEFGGAVPYRPVEDLAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLVRQPKWGHLKD LHR | |||
| Full Sequence |
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| Protein Sequence Length: 836 Download |
| MNVILAAVLV SSLLVSVIAS VSYDHKAITI NGKRRILLSG SIHYPRSTPE MWPDLIQKAK 60 EGGLDVIQTY VFWNGHEPSP GKYYFGGNYD LVRFIKLVKQ AGLYVHLRIG PYVCAEWNFG 120 GFPVWLKYIP GIAFRTNNGP FKAYMQRFTK KIVDMMKAEG LFESQGGPII LSQIENEYGP 180 MEYELGAAGR AYSQWAAQMA VGLGTGVPWV MCKQDDAPDP IINSCNGFYC DYFSPNKAYK 240 PKMWTEAWTG WFTEFGGAVP YRPVEDLAFS VARFIQKGGS FINYYMYHGG TNFGRTAGGP 300 FIATSYDYDA PLDEYGLVRQ PKWGHLKDLH RAIKLCEPAL VSGDPSVMPL GRFQEAHVFK 360 SKYGHCAAFL ANYNPRSFAK VAFGNMHYNL PPWSISILPD CKNTVYNTAR VGAQSARMKM 420 VPVPIHGAFS WQAYNEEAPS SNGERSFTTV GLVEQINTTR DVSDYLWYST DVKIDPDEGF 480 LKTGKYPTLT VLSAGHALHV FVNDQLSGTA YGSLEFPKIT FSKGVNLRAG INKISILSIA 540 VGLPNVGPHF ETWNAGVLGP VTLNGLNEGR RDLSWQKWSY KVGVEGEAMS LHSLSGSSSV 600 EWTAGSFVAR RQPLTWFKTT FNAPAGNSPL ALDMNSMGKG QIWINGKSIG RHWPAYKASG 660 SCGWCDYAGT FNEKKCLSNC GEASQRWYHV PRSWLNPTGN LLVVFEEWGG DPNGISLVRR 720 EVDSVCADIY EWQPTLMNYQ MQASGKVNKP LRPKAHLQCG PGQKISSVKF ASFGTPEGAC 780 GSYREGSCHA HHSYDAFERL CVGQNWCSVT VAPEMFGGDP CPSVMKKLAV EVVCS* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 1.0e-6 | 43 | 179 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 2.0e-21 | 757 | 834 | 82 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 3.0e-24 | 23 | 323 | 368 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 6.0e-163 | 27 | 333 | 323 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 23 | 835 | 813 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK96254.1 | 0 | 16 | 835 | 28 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
| GenBank | ACP18875.1 | 0 | 24 | 835 | 24 | 836 | beta-galactosidase pBG(a) [Carica papaya] |
| EMBL | CAC44500.1 | 0 | 12 | 835 | 21 | 843 | beta-galactosidase [Fragaria x ananassa] |
| RefSeq | XP_002327432.1 | 0 | 16 | 835 | 21 | 839 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527409.1 | 0 | 2 | 835 | 13 | 845 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 9.80909e-45 | 30 | 329 | 17 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 4.00001e-40 | 20 | 403 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 4.00001e-40 | 20 | 403 | 10 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778160 | 703 | 23 | 724 | 0 |
| HO780602 | 662 | 71 | 720 | 0 |
| HO795552 | 526 | 111 | 636 | 0 |
| HO795552 | 50 | 23 | 72 | 2e-36 |
| HO795552 | 51 | 72 | 122 | 2e-36 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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