Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_26.234 |
Family | AA1 |
Protein Properties | Length: 539 Molecular Weight: 59730.3 Isoelectric Point: 8.6822 |
Chromosome | Chromosome/Scaffold: 26 Start: 1673509 End: 1677933 |
Description | SKU5 similar 5 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 44 | 493 | 0 |
QGILINGQFPGPDIHSVTNDNLIINVFNSLDEPFLLSWSGIQNRRNSYEDGVYGTTCPIPPGKNFTYILQVKDQIGSFFYFPSLAFHKAAGGFGGIRILS RPRIPVPFPDPSGDWTVLIGDWYKSNHTDLKAHLDSGKKLPFPDAILINGRGSGAAFTVEQGKTYRFRVSNVGLQNSLNFRIQNHKLKLVEVEGTHTLQT TYSSFDLHVGQSASFLLTADQPAQDYYIVVSSRFTDTILTTTGTLHYSNSAGAVSGPIPGGPTIQIDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINT TRTIKLASSAGQINGKQRYAINSVSFIPADTPLKLADFFQISGVYRVGSISDHPTGGGMYLDTSVMQADYRAFIEIVFQNDEDIVQSYHLDGYSFFVVGM DGGQWTPDSRNGYNLRDAVSRCTTQVYPKSWTAIYVALDNVGMWNLRSEF |
Full Sequence |
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Protein Sequence Length: 539 Download |
MPLNSAVVCA FLSLLAIAAA EDPYRFFSWN VTYGDIWPLG VRQQGILING QFPGPDIHSV 60 TNDNLIINVF NSLDEPFLLS WSGIQNRRNS YEDGVYGTTC PIPPGKNFTY ILQVKDQIGS 120 FFYFPSLAFH KAAGGFGGIR ILSRPRIPVP FPDPSGDWTV LIGDWYKSNH TDLKAHLDSG 180 KKLPFPDAIL INGRGSGAAF TVEQGKTYRF RVSNVGLQNS LNFRIQNHKL KLVEVEGTHT 240 LQTTYSSFDL HVGQSASFLL TADQPAQDYY IVVSSRFTDT ILTTTGTLHY SNSAGAVSGP 300 IPGGPTIQID WSLNQARSIR TNLTASGPRP NPQGSYHYGL INTTRTIKLA SSAGQINGKQ 360 RYAINSVSFI PADTPLKLAD FFQISGVYRV GSISDHPTGG GMYLDTSVMQ ADYRAFIEIV 420 FQNDEDIVQS YHLDGYSFFV VGMDGGQWTP DSRNGYNLRD AVSRCTTQVY PKSWTAIYVA 480 LDNVGMWNLR SEFWARQYLG QQFYLRVYTT STSLRDEYPI PKNALLCGRA SGRRTRPL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 0 | 5 | 538 | 535 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 13 | 535 | 527 | + oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 8 | 535 | 528 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 1 | 532 | 541 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 2 | 531 | 542 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL09733.1 | 0 | 5 | 538 | 8 | 541 | At1g76160/T23E18_10 [Arabidopsis thaliana] |
GenBank | AAM97070.1 | 0 | 5 | 538 | 8 | 541 | pectinesterase, putative [Arabidopsis thaliana] |
GenBank | ACJ85585.1 | 0 | 1 | 538 | 1 | 544 | unknown [Medicago truncatula] |
RefSeq | NP_177743.1 | 0 | 5 | 538 | 8 | 541 | sks5 (SKU5 Similar 5); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002510630.1 | 0 | 1 | 538 | 1 | 546 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 7.00649e-45 | 25 | 528 | 4 | 539 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1asq_A | 7.00649e-45 | 25 | 528 | 4 | 539 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1asp_B | 7.00649e-45 | 25 | 528 | 4 | 539 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1asp_A | 7.00649e-45 | 25 | 528 | 4 | 539 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1aso_B | 7.00649e-45 | 25 | 528 | 4 | 539 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY262568 | 345 | 56 | 399 | 0 |
DN795140 | 292 | 108 | 399 | 0 |
HO801725 | 439 | 98 | 534 | 0 |
DT554274 | 299 | 146 | 443 | 0 |
EC919612 | 301 | 43 | 342 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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