y
Basic Information | |
---|---|
Species | Carica papaya |
Cazyme ID | evm.model.supercontig_27.21 |
Family | CBM57 |
Protein Properties | Length: 416 Molecular Weight: 46570.6 Isoelectric Point: 5.995 |
Chromosome | Chromosome/Scaffold: 27 Start: 155534 End: 157524 |
Description | receptor like protein 4 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM57 | 181 | 332 | 1.2e-24 |
DEDYSGDHWGGDRFWHPIRTFIQSADQVRSTEATIKKASIAPNFYPEALYQSAIVSTDSQLDITYSMDVDPNRNYSVWLHFAEIDASVSVVGHRVFDILI NGDVTFPGVDIVKMSGDRYTALVLNTTMAVKGRTLTITLRPKEGSHAIINAI |
Full Sequence |
---|
Protein Sequence Length: 416 Download |
MRISCGARRN VRTAPTYTLW YKDFAYTGGI PANATRPSYI TPPLSTLRYF PLSEGPNNCY 60 NVNRVPKGHY TVRIFFGLVN QPNFDSEPLF DISIEGTQVY SLKSGWTGQD SQAFLEVLVF 120 ITDRSVAICF HSTGHGDPAI LSIEILQVDD GAYYFGPEWG DQVILRTVTR LTCGTGKPKF 180 DEDYSGDHWG GDRFWHPIRT FIQSADQVRS TEATIKKASI APNFYPEALY QSAIVSTDSQ 240 LDITYSMDVD PNRNYSVWLH FAEIDASVSV VGHRVFDILI NGDVTFPGVD IVKMSGDRYT 300 ALVLNTTMAV KGRTLTITLR PKEGSHAIIN AIEVFEVITA QFTTFPEEVR ALQTLKSALG 360 LPLRLGWNGD PCVPQQHPWS GADCQFDKNT SKWFIDGLYC LYPTHFNNYL YSLNV* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam11721 | Malectin | 3.0e-13 | 173 | 332 | 172 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
pfam12819 | Malectin_like | 5.0e-63 | 3 | 337 | 349 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
PLN03150 | PLN03150 | 0 | 1 | 398 | 398 | + hypothetical protein; Provisional |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF16758.1 | 0 | 1 | 398 | 29 | 426 | AC010155_11 F3M18.23 [Arabidopsis thaliana] |
RefSeq | NP_174156.1 | 0 | 1 | 398 | 29 | 426 | AtRLP4 (Receptor Like Protein 4); protein binding [Arabidopsis thaliana] |
RefSeq | XP_002279791.1 | 0 | 1 | 398 | 1 | 399 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305781.1 | 0 | 1 | 398 | 1 | 398 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509445.1 | 0 | 1 | 398 | 30 | 431 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
EX133552 | 270 | 1 | 270 | 0 |
HO809175 | 179 | 23 | 201 | 0 |
HO809175 | 181 | 198 | 378 | 0 |
GO878946 | 304 | 1 | 303 | 0 |
GO882391 | 299 | 1 | 298 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|