CAZyme Information

Basic Information
SpeciesCarica papaya
Cazyme IDevm.model.supercontig_273.9
FamilyGH18
Protein PropertiesLength: 350 Molecular Weight: 40050.9 Isoelectric Point: 9.8623
ChromosomeChromosome/Scaffold: 273 Start: 106669 End: 110029
DescriptionGlycosyl hydrolase superfamily protein
View CDS
External Links
NCBI Taxonomy
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH181053473.2e-26
  YPVLAYITSWNSKGYEMAKRFNSKFTHLSPVWYDLKSLGTGLLLEGRHNADKAWISELRTRGDVMLLPRVVLEAFPKELLRRKKLRDEAIHLIVTECKEM
  KYDGIVLESWSRWAAFGVLHDPDMRKMALQFIKQLGDALHSVSSMRRDKQHLQLVFVIGPPRSEKLEEHDITPEDLQSLNDSVDGFSLMTYDFSGPHNPG
  PSAPLKWIDFTLQLLLPSASNKAQSLTSKIFLGINFYGNDFVL
Full Sequence
Protein Sequence     Length: 350     Download
MAKRRERRVA PSSDWRKVRV QTTNPGDQFG DSASGRKLLI IFVLFFIVIP AVSVLVYWIK    60
FTPRVTHAGL SVHQRGLIKT DISYQEILTE NAKVSENVSQ RHYTYPVLAY ITSWNSKGYE    120
MAKRFNSKFT HLSPVWYDLK SLGTGLLLEG RHNADKAWIS ELRTRGDVML LPRVVLEAFP    180
KELLRRKKLR DEAIHLIVTE CKEMKYDGIV LESWSRWAAF GVLHDPDMRK MALQFIKQLG    240
DALHSVSSMR RDKQHLQLVF VIGPPRSEKL EEHDITPEDL QSLNDSVDGF SLMTYDFSGP    300
HNPGPSAPLK WIDFTLQLLL PSASNKAQSL TSKIFLGINF YGNDFVLSEX 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
COG3858COG38581.0e-6183348168+
pfam00704Glyco_hydro_181.0e-9185345167+
cd02874GH18_CFLE_spore_hydrolase2.0e-14107347252+
smart00636Glyco_187.0e-21107349263+
cd02876GH18_SI-CLP2.0e-99103348251+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAN82499.1013491429hypothetical protein [Vitis vinifera]
EMBLCBI40499.1013491351unnamed protein product [Vitis vinifera]
RefSeqNP_192013.105934856344glycosyl hydrolase family 18 protein [Arabidopsis thaliana]
RefSeqXP_002320856.106034927314predicted protein [Populus trichocarpa]
RefSeqXP_002523373.1013491348chitinase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3bxw_A9.99995e-417234945310B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3bxw_B9.99995e-417234945310B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
Transmembrane Domains
StartEnd
3859
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DY27458234713470
FC88105630413040
DY27271430653100
FC91674630253060
DY272714363103451.2
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_013_00129.1
Arabidopsis lyrata352729
Arabidopsis thalianaAT4G01040.1
Brachypodium distachyonBradi2g43770.1
Brassica rapaBra000939
Capsella rubellaCarubv10001405m
Chlamydomonas reinhardtiiCre03.g200650.t1.1
Citrus clementinaCiclev10020231m
Citrus sinensisorange1.1g014108morange1.1g014001m
Cucumis sativusCucsa.259130.2Cucsa.259130.1
Eucalyptus grandisEucgr.E00067.1
Fragaria vescamrna19212.1-v1.0-hybrid
Glycine maxGlyma03g41760.2Glyma19g44401.1Glyma03g41760.1
Gossypium raimondiiGorai.008G124300.1
Linum usitatissimumLus10005946Lus10029447
Malus domesticaMDP0000223446MDP0000126058
Manihot esculentacassava4.1_001521m
Medicago truncatulaMedtr5g025480.1
Mimulus guttatusmgv1a010899m
Oryza sativaLOC_Os01g43220.1
Panicum virgatumPavirv00054484mPavirv00033212m
Physcomitrella patensPp1s162_65V6.1
Phaseolus vulgarisPhvul.006G111900.1
Picea abiesMA_557825g0010
Populus trichocarpaPotri.014G096700.1Potri.014G096700.2Potri.014G096700.4Potri.014G096700.3
Prunus persicappa006146m
Ricinus communis29742.m001446
Setaria italicaSi002099m
Selaginella moellendorffii249085240
Sorghum bicolorSb03g028160.1
Thellungiella halophilaThhalv10028671m
Vitis viniferaGSVIVT01027076001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny