Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_277.3 |
Family | GH79 |
Protein Properties | Length: 548 Molecular Weight: 60278.4 Isoelectric Point: 7.9717 |
Chromosome | Chromosome/Scaffold: 277 Start: 8178 End: 11592 |
Description | glucuronidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH79 | 56 | 540 | 0 |
DDDFVCATLDWWPPEKCDYGTCSWGLASLLNLDLNNNMFLNAIKAFSPLKIRLGGSLQDKVIYGTEDEKQPCVPFTRNASEMFGFTQGCLPMKRWDELNA FFQKSGAKIIFGLNALNGRSIKSDGSAVGPWDYTNAESFIRYTVGKNYTIHGWELGNELSGSGVGTRVAANQYALDTIALQNIVQTIYSSVGYKPLIIAP GGFFDGTWFKEFIDKTTKSLDVVTHHIYNLGPGVDQHLVERILDPHYLDGEANTFRDLKNTLKNSKTSATAWVGEAGGAYNSGRNLVTNAFVFSFWYLDQ LGMSSVYDTKTYCRQSLIGGNYGLLNTTTFVPNPDYYSALLWHRLMGRNVLSTSFSGNNKIRAYTHCAKQSKGITVLLINLDSNTTIESKVQFNSSWAVR HKHRNMSHKRIILLPKDSTMPGFIREEYHLTAQDGNLQSQKMLLNGNVLSVTSSGDIPSLEPVHVNSTLPITVGPFSIVFVHMPS |
Full Sequence |
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Protein Sequence Length: 548 Download |
MGSQIWQVGV WIWVSFFVCS SFSPSSGSRV AVPDGGAGSS QGTVFVDGKS AIGRIDDDFV 60 CATLDWWPPE KCDYGTCSWG LASLLNLDLN NNMFLNAIKA FSPLKIRLGG SLQDKVIYGT 120 EDEKQPCVPF TRNASEMFGF TQGCLPMKRW DELNAFFQKS GAKIIFGLNA LNGRSIKSDG 180 SAVGPWDYTN AESFIRYTVG KNYTIHGWEL GNELSGSGVG TRVAANQYAL DTIALQNIVQ 240 TIYSSVGYKP LIIAPGGFFD GTWFKEFIDK TTKSLDVVTH HIYNLGPGVD QHLVERILDP 300 HYLDGEANTF RDLKNTLKNS KTSATAWVGE AGGAYNSGRN LVTNAFVFSF WYLDQLGMSS 360 VYDTKTYCRQ SLIGGNYGLL NTTTFVPNPD YYSALLWHRL MGRNVLSTSF SGNNKIRAYT 420 HCAKQSKGIT VLLINLDSNT TIESKVQFNS SWAVRHKHRN MSHKRIILLP KDSTMPGFIR 480 EEYHLTAQDG NLQSQKMLLN GNVLSVTSSG DIPSLEPVHV NSTLPITVGP FSIVFVHMPS 540 IVLPGCS* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam03662 | Glyco_hydro_79n | 0 | 42 | 357 | 317 | + Glycosyl hydrolase family 79, N-terminal domain. Family of endo-beta-N-glucuronidase, or heparanase. Heparan sulfate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulfate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular micro-environment. Heparanase degrades HS at specific intra-chain sites. The enzyme is synthesised as a latent approximately 65 kDa protein that is processed at the N-terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumour cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
GO:0016798 | hydrolase activity, acting on glycosyl bonds |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81917.1 | 0 | 1 | 546 | 1 | 554 | hypothetical protein [Vitis vinifera] |
EMBL | CBI25561.1 | 0 | 8 | 546 | 1 | 532 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263173.1 | 0 | 1 | 546 | 5 | 558 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324603.1 | 0 | 42 | 547 | 1 | 506 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002533671.1 | 0 | 1 | 546 | 1 | 550 | heparanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vo0_A | 0.000000008 | 151 | 442 | 122 | 406 | B Chain B, Crystal Structure Of S-Adenosylmethionine-Dependent Methyltransferase From Escherichia Coli In Complex With S-Adenosylmethionine |
PDB | 3vnz_A | 0.000000008 | 151 | 442 | 122 | 406 | B Chain B, Crystal Structure Of S-Adenosylmethionine-Dependent Methyltransferase From Escherichia Coli In Complex With S-Adenosylmethionine |
PDB | 3vny_A | 0.000000008 | 151 | 442 | 122 | 406 | A Chain A, Crystal Structure Of Beta-Glucuronidase From Acidobacterium Capsulatum |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT548485 | 284 | 97 | 380 | 0 |
CX636465 | 275 | 187 | 461 | 0 |
CO091102 | 279 | 110 | 388 | 0 |
DT569595 | 278 | 103 | 380 | 0 |
HO806132 | 351 | 1 | 351 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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