| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_29.158 |
| Family | CE8 |
| Protein Properties | Length: 363 Molecular Weight: 40157.3 Isoelectric Point: 8.6009 |
| Chromosome | Chromosome/Scaffold: 29 Start: 1700881 End: 1703829 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 61 | 352 | 0 |
| ITVDVSGSGHFRSVQDAVNAVPENNRMNVLIQINAGYYIEKVVVPATKPYITFQGAGRDVTVIEWHDRACDRGPDGQQLRTYQTASVTVYANYFSARNIS VKNTAPAPMPGMHGWQAVAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHSIAKRFGSIAAHDRKSPEEKTGFA FVRCRVTGTGPLYVGRAMGQYSRIVYAFTYFDDVVAHGGWDDWDHISNKNKTAFFGVYKCWGPGVGATRGVSWARELDYEVAHPFLVKSFVN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 363 Download |
| MASSSLFSYY IALYTFFFSL VAPLLPLTTS AKPPAPAPAP APNNTTRHHH NWVGPVGHRL 60 ITVDVSGSGH FRSVQDAVNA VPENNRMNVL IQINAGYYIE KVVVPATKPY ITFQGAGRDV 120 TVIEWHDRAC DRGPDGQQLR TYQTASVTVY ANYFSARNIS VKNTAPAPMP GMHGWQAVAF 180 RISGDKAYFS GCGFYGAQDT LCDDAGRHYF KECYIEGSID FIFGNGRSMY KDCELHSIAK 240 RFGSIAAHDR KSPEEKTGFA FVRCRVTGTG PLYVGRAMGQ YSRIVYAFTY FDDVVAHGGW 300 DDWDHISNKN KTAFFGVYKC WGPGVGATRG VSWARELDYE VAHPFLVKSF VNGRHWIAPQ 360 DA* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02304 | PLN02304 | 4.0e-102 | 61 | 362 | 310 | + probable pectinesterase | ||
| PLN02665 | PLN02665 | 3.0e-103 | 59 | 359 | 303 | + pectinesterase family protein | ||
| PLN02671 | PLN02671 | 1.0e-109 | 57 | 357 | 303 | + pectinesterase | ||
| PLN02682 | PLN02682 | 2.0e-133 | 51 | 359 | 323 | + pectinesterase family protein | ||
| PLN02634 | PLN02634 | 0 | 44 | 362 | 319 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD64977.1 | 0 | 1 | 362 | 1 | 360 | pectinesterase family protein [Brassica oleracea] |
| GenBank | ABD65006.1 | 0 | 39 | 362 | 18 | 344 | pectinesterase family protein [Brassica oleracea] |
| EMBL | CBI31927.1 | 0 | 11 | 362 | 1 | 349 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002266321.1 | 0 | 34 | 362 | 28 | 356 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002303355.1 | 0 | 46 | 359 | 1 | 314 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 3.00004e-41 | 61 | 357 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 2e-33 | 67 | 357 | 11 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 1e-18 | 71 | 237 | 18 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 1e-18 | 71 | 237 | 18 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 1e-18 | 71 | 237 | 18 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
