| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_3.25 |
| Family | CE8 |
| Protein Properties | Length: 372 Molecular Weight: 41203.2 Isoelectric Point: 9.5641 |
| Chromosome | Chromosome/Scaffold: 3 Start: 174956 End: 176650 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 75 | 361 | 0 |
| KVKKDGSGNFKRINDAIKSVPSGNKKRVIIWIGAGDYFEKVIIDKTKQFITLYGEPGKTPRIMWDDTAAELGTFGSATLIALPDYFMAVNLIIVNSSPRP DYKKTKGPQALAMRIDGNKAAFYNCRFIGFQDTLCDDRGFHFFKDCYVEGTVDFIFGRGTSLYLNSEMHVVDDKGLRVITAQGRNSPTDTSGYSFVHCKI TGSGTGIYLGRAWMAAPKVVYAYTEMGNVVNPEGWSNNFQPERSKTVFYGEYKCTGPGASTDHRVKYTKKLTDAEAQKFLVLDYIQG | |||
| Full Sequence |
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| Protein Sequence Length: 372 Download |
| MGISTRSRHN YGYKVIILTI LVIATIVRPN ESTQIPANKN QVESWFHENV KPAAARKGTL 60 DPVLAEAEAG ATIIKVKKDG SGNFKRINDA IKSVPSGNKK RVIIWIGAGD YFEKVIIDKT 120 KQFITLYGEP GKTPRIMWDD TAAELGTFGS ATLIALPDYF MAVNLIIVNS SPRPDYKKTK 180 GPQALAMRID GNKAAFYNCR FIGFQDTLCD DRGFHFFKDC YVEGTVDFIF GRGTSLYLNS 240 EMHVVDDKGL RVITAQGRNS PTDTSGYSFV HCKITGSGTG IYLGRAWMAA PKVVYAYTEM 300 GNVVNPEGWS NNFQPERSKT VFYGEYKCTG PGASTDHRVK YTKKLTDAEA QKFLVLDYIQ 360 GSQWLLPPPK V* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02634 | PLN02634 | 9.0e-83 | 69 | 367 | 307 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 7.0e-91 | 71 | 365 | 295 | + putative pectinesterase | ||
| PLN02304 | PLN02304 | 5.0e-92 | 72 | 367 | 304 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 4.0e-107 | 71 | 367 | 304 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 0 | 30 | 370 | 341 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB09012.1 | 0 | 30 | 369 | 25 | 362 | pectin methylesterase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_177152.2 | 0 | 18 | 371 | 12 | 361 | PPME1; pectinesterase [Arabidopsis thaliana] |
| RefSeq | NP_568181.1 | 0 | 16 | 371 | 8 | 361 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002277202.1 | 0 | 30 | 369 | 26 | 364 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002530224.1 | 0 | 16 | 371 | 15 | 368 | Pectinesterase U1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 4.99983e-42 | 74 | 365 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 5e-39 | 76 | 365 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 3e-19 | 71 | 353 | 6 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 3e-19 | 71 | 353 | 6 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 3e-19 | 71 | 353 | 6 | 328 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DY300112 | 297 | 35 | 331 | 0 |
| DY300051 | 301 | 35 | 335 | 0 |
| DY275544 | 318 | 35 | 351 | 0 |
| DY263772 | 305 | 35 | 339 | 0 |
| DY292191 | 312 | 35 | 345 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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