| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_3.29 |
| Family | CE8 |
| Protein Properties | Length: 276 Molecular Weight: 30011.9 Isoelectric Point: 9.4861 |
| Chromosome | Chromosome/Scaffold: 3 Start: 184381 End: 185862 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 108 | 240 | 1.3e-36 |
| IFGRGTSLYLNTEIHVVDDKRLRVITAQGRNSESEGTGYSFVHCKITGSGTGIYLGRAWMAAPKVVYAFTDMGLVVHPKGWSANFKPEREDTVFHGEYKC TGPGASTEGRVDYTKQLSGAEAKVFLSLDYIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 276 Download |
| MVSTIVRPNE STTISAEKGK IESWFNENVK PAADRKGALD PVLAEAEVEP TIIKNSSPRP 60 DCSKTKRPTE TGLHSTAADS SASKTHFVTT EASTSSRIAT WKELLTSIFG RGTSLYLNTE 120 IHVVDDKRLR VITAQGRNSE SEGTGYSFVH CKITGSGTGI YLGRAWMAAP KVVYAFTDMG 180 LVVHPKGWSA NFKPEREDTV FHGEYKCTGP GASTEGRVDY TKQLSGAEAK VFLSLDYIQG 240 TKWLLLPPKS KTGSAGLNPD ALIRVNRKAE TWAWK* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02665 | PLN02665 | 1.0e-11 | 1 | 54 | 54 | + pectinesterase family protein | ||
| PLN02480 | PLN02480 | 7.0e-36 | 108 | 244 | 140 | + Probable pectinesterase | ||
| PLN02432 | PLN02432 | 4.0e-39 | 108 | 244 | 137 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 9.0e-47 | 108 | 246 | 139 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 2.0e-86 | 52 | 249 | 216 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_196360.1 | 0 | 53 | 249 | 160 | 360 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_200976.1 | 0 | 10 | 248 | 82 | 336 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002530224.1 | 0 | 52 | 249 | 165 | 367 | Pectinesterase U1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0.0000000003 | 108 | 244 | 159 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0.00000001 | 108 | 244 | 155 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| BQ641024 | 144 | 108 | 251 | 0 |
| CA853990 | 145 | 108 | 252 | 0 |
| DY017561 | 142 | 108 | 249 | 0 |
| EE551409 | 142 | 108 | 249 | 0 |
| GR463358 | 142 | 108 | 249 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |