Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_32.24 |
Family | GH17 |
Protein Properties | Length: 373 Molecular Weight: 41156.6 Isoelectric Point: 4.5695 |
Chromosome | Chromosome/Scaffold: 32 Start: 365673 End: 367457 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 29 | 345 | 0 |
VGINYGQIANNLPSPSRVAILLQSLNISRVKLYDADPDVLYAFSNSNVDFIIGLGNEYLENMTDPIKAQNWIQQRVQPHLPQTKITCITVGNEVFNSSDS NLVRNLLPAMQTVYGALVNLGLQRQVTVTTAHSLTILSNSYPPSAGAFRSDLAEYLQPLLNFHSQINSPFLINAYPYFAYKENPNEVSLDYVLFQPNQGT TDPNTNLHYDNMLYAQIDAVYSAIKAMGHTDIDVRISETGWPSRGDSNEAGATPENAGLYNGNLLRRIEERQGTPARPAVPVDIHVFALFNENLKPGPAS ERNYGLYYPDGTPVYNI |
Full Sequence |
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Protein Sequence Length: 373 Download |
MAAYFILCRL LLLLLIIFSD SAEIDGAGVG INYGQIANNL PSPSRVAILL QSLNISRVKL 60 YDADPDVLYA FSNSNVDFII GLGNEYLENM TDPIKAQNWI QQRVQPHLPQ TKITCITVGN 120 EVFNSSDSNL VRNLLPAMQT VYGALVNLGL QRQVTVTTAH SLTILSNSYP PSAGAFRSDL 180 AEYLQPLLNF HSQINSPFLI NAYPYFAYKE NPNEVSLDYV LFQPNQGTTD PNTNLHYDNM 240 LYAQIDAVYS AIKAMGHTDI DVRISETGWP SRGDSNEAGA TPENAGLYNG NLLRRIEERQ 300 GTPARPAVPV DIHVFALFNE NLKPGPASER NYGLYYPDGT PVYNIGLQGY LPELAYASSI 360 NVLPNFAVLI FAL |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-7 | 19 | 338 | 339 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-95 | 29 | 345 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU21124.1 | 0 | 26 | 372 | 34 | 381 | unknown [Glycine max] |
RefSeq | NP_565652.1 | 0 | 21 | 370 | 21 | 374 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_973548.1 | 0 | 21 | 369 | 21 | 373 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002328249.1 | 0 | 1 | 362 | 1 | 365 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523810.1 | 0 | 22 | 362 | 6 | 346 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 29 | 345 | 2 | 313 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
PDB | 3f55_C | 0 | 29 | 345 | 2 | 313 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
PDB | 3f55_B | 0 | 29 | 345 | 2 | 313 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
PDB | 3f55_A | 0 | 29 | 345 | 2 | 313 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
PDB | 3em5_D | 0 | 29 | 345 | 2 | 313 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO825834 | 329 | 24 | 351 | 0 |
DY269000 | 298 | 28 | 325 | 0 |
HO810153 | 329 | 24 | 351 | 0 |
EX667194 | 291 | 36 | 326 | 0 |
GR996037 | 283 | 66 | 348 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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