Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_32.84 |
Family | CBM43 |
Protein Properties | Length: 224 Molecular Weight: 23775.1 Isoelectric Point: 4.8055 |
Chromosome | Chromosome/Scaffold: 32 Start: 1092614 End: 1093324 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 135 | 213 | 4.6e-32 |
WCVAKPSVPDPIVQEAMNYACGSGADCDSIQADGPCFQPNTLFAHASFAFNSYWQKTKGAGGTCEFGGTAMLVTVDPIK |
Full Sequence |
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Protein Sequence Length: 224 Download |
MALIRGDSAK KLRAFKHTFL EQVMENLNLV QSLDSSNTQP YGVSSPFNLP PYDSLSPIPL 60 PPYCVFPPPS STTPTPIPNP PPAPFYFVPN PPSPATYTPK PPSAVPSPTV FLPPIVYPPP 120 TAPPPPNVAP SLALWCVAKP SVPDPIVQEA MNYACGSGAD CDSIQADGPC FQPNTLFAHA 180 SFAFNSYWQK TKGAGGTCEF GGTAMLVTVD PIKSKENNGE NYD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 9.0e-26 | 134 | 205 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-38 | 134 | 211 | 78 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN78496.1 | 0 | 8 | 211 | 35 | 252 | hypothetical protein [Vitis vinifera] |
EMBL | CBI34142.1 | 0 | 8 | 211 | 26 | 243 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264622.1 | 0 | 8 | 213 | 35 | 254 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312230.1 | 0 | 97 | 218 | 177 | 298 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516415.1 | 0 | 33 | 211 | 1 | 253 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.000000000000002 | 124 | 211 | 5 | 89 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CK297659 | 79 | 133 | 211 | 1.99993e-41 |
EG434920 | 79 | 133 | 211 | 8.00001e-41 |
EG434934 | 79 | 133 | 211 | 2e-40 |
EG434915 | 79 | 133 | 211 | 3e-40 |
EG434931 | 79 | 133 | 211 | 3e-40 |
Sequence Alignments (This image is cropped. Click for full image.) |
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