Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_34.173 |
Family | GH5 |
Protein Properties | Length: 434 Molecular Weight: 49647.5 Isoelectric Point: 6.8535 |
Chromosome | Chromosome/Scaffold: 34 Start: 1490592 End: 1497095 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 54 | 379 | 1.1e-31 |
GKILYVNGWNSYWLMDHAVDEYSRYRIGSMLQAGAKMGLTVCRTWAFNDGDYNALQLSPGRFDERVFKALDHVIAEARKHGVRLLLSLVNNLQAYGGKTQ YVKWAWQDGVGLSSSNDSFFFDPSIRRYFKNYVLTLLTRKNTITGIEYRNDPIIFGWELINEPRCMSDPSGDTLQDWLDEMSAFVKSIDNKHLLTVGLEG FYGPKSPKRLTVNPEFWAATLGADFIRNSEIANVDFASVHIYPDHWFHVQEFEEKLNFLSKWMLSHIEDGDNELKKPVMFTEYGLSNLNKDFEQSQRDRF YKTILDTIYKSAKRNGSGGGALVWQF |
Full Sequence |
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Protein Sequence Length: 434 Download |
MVAAGGNGLL FPILGFASCV VFIYMSFSDL SLSYHHESEL SFVTRNGTQF MVDGKILYVN 60 GWNSYWLMDH AVDEYSRYRI GSMLQAGAKM GLTVCRTWAF NDGDYNALQL SPGRFDERVF 120 KALDHVIAEA RKHGVRLLLS LVNNLQAYGG KTQYVKWAWQ DGVGLSSSND SFFFDPSIRR 180 YFKNYVLTLL TRKNTITGIE YRNDPIIFGW ELINEPRCMS DPSGDTLQDW LDEMSAFVKS 240 IDNKHLLTVG LEGFYGPKSP KRLTVNPEFW AATLGADFIR NSEIANVDFA SVHIYPDHWF 300 HVQEFEEKLN FLSKWMLSHI EDGDNELKKP VMFTEYGLSN LNKDFEQSQR DRFYKTILDT 360 IYKSAKRNGS GGGALVWQFL IEGMEEFNDD FGMVPWQRAA TYKLFTKQSC RLTKLPGSVL 420 QNKNLKELCS KRP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12876 | Cellulase-like | 0.0009 | 200 | 295 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 3.0e-5 | 200 | 349 | 151 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 2.0e-23 | 64 | 395 | 335 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95966.1 | 0 | 1 | 432 | 4 | 434 | unknown [Populus trichocarpa] |
EMBL | CBI21857.1 | 0 | 5 | 432 | 3 | 431 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_179660.2 | 0 | 1 | 433 | 1 | 433 | glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] |
RefSeq | XP_002273772.1 | 0 | 5 | 432 | 8 | 436 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002330687.1 | 0 | 1 | 432 | 4 | 434 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 38 | 415 | 2 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 51 | 395 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 51 | 395 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 51 | 395 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 51 | 395 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |