| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_34.175 |
| Family | GH51 |
| Protein Properties | Length: 456 Molecular Weight: 49350.4 Isoelectric Point: 4.652 |
| Chromosome | Chromosome/Scaffold: 34 Start: 1510230 End: 1514743 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 177 | 451 | 1.6e-37 |
| FMNSNGSEILASANITASSSDAQNWTRKEVVLEAKGTDPHARLQLTTATKGVIWFDQIYTNSKDMFSLAHKFDHAPREGPKAFVSEYAVTGDDAGNGTLL AAIAEAGFLIGLEKNSDVVEMASYAPLFVNVNDRRWNPDAIVFDSSRLYGTPSYWVQQVFAESSGATLLNATLQTDSSDSLIASAVAWKDKSTGKNYIKI KIVNFGSNQVTLKVSLDGVVSEFALTQTVLTSGNVMDENSFDQPNKVALHLTQLQNVAKEMEFTLSPHSFTAFDL | |||
| Full Sequence |
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| Protein Sequence Length: 456 Download |
| MACKTSGLLF FFIGACCVYQ SHAFKAVETQ ASLQDGETQT AWLTVDASEE TGRIIPETLF 60 GIFYEEINHA GAGGLWAELV SNRGFEAGGT SIPSNIDPWS IIGDESSVTV STDRSSQFYR 120 NPVALRMDVL CDSNVCPPGG VGVYNPGYWG MNIEGGKKYK VVLYVRSMGA INVAVSFMNS 180 NGSEILASAN ITASSSDAQN WTRKEVVLEA KGTDPHARLQ LTTATKGVIW FDQIYTNSKD 240 MFSLAHKFDH APREGPKAFV SEYAVTGDDA GNGTLLAAIA EAGFLIGLEK NSDVVEMASY 300 APLFVNVNDR RWNPDAIVFD SSRLYGTPSY WVQQVFAESS GATLLNATLQ TDSSDSLIAS 360 AVAWKDKSTG KNYIKIKIVN FGSNQVTLKV SLDGVVSEFA LTQTVLTSGN VMDENSFDQP 420 NKVALHLTQL QNVAKEMEFT LSPHSFTAFD LLKNQ* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3534 | AbfA | 5.0e-8 | 274 | 445 | 179 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| pfam06964 | Alpha-L-AF_C | 2.0e-45 | 261 | 445 | 202 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| smart00813 | Alpha-L-AF_C | 1.0e-51 | 261 | 445 | 197 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABV08815.1 | 0 | 233 | 452 | 422 | 645 | alpha-L-arabinofuranosidase [Fragaria x ananassa] |
| GenBank | ACV85694.1 | 0 | 14 | 248 | 34 | 269 | ripening-reduced alpha-L-arabinofuranosidase [Carica papaya] |
| GenBank | ACV85694.1 | 0 | 231 | 453 | 465 | 692 | ripening-reduced alpha-L-arabinofuranosidase [Carica papaya] |
| RefSeq | XP_002307940.1 | 0 | 8 | 234 | 12 | 228 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002307940.1 | 0 | 233 | 452 | 430 | 651 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vrk_C | 0.00003 | 277 | 451 | 323 | 493 | A Chain A, Structure Of A Seleno-Methionyl Derivative Of Wild Type Arabinofuranosidase From Thermobacillus Xylanilyticus |
| PDB | 2vrk_B | 0.00003 | 277 | 451 | 323 | 493 | A Chain A, Structure Of A Seleno-Methionyl Derivative Of Wild Type Arabinofuranosidase From Thermobacillus Xylanilyticus |
| PDB | 2vrk_A | 0.00003 | 277 | 451 | 323 | 493 | A Chain A, Structure Of A Seleno-Methionyl Derivative Of Wild Type Arabinofuranosidase From Thermobacillus Xylanilyticus |
| PDB | 2vrq_C | 0.00003 | 277 | 451 | 323 | 493 | A Chain A, Structure Of An Inactive Mutant Of Arabinofuranosidase From Thermobacillus Xylanilyticus In Complex With A Pentasaccharide |
| PDB | 2vrq_B | 0.00003 | 277 | 451 | 323 | 493 | A Chain A, Structure Of An Inactive Mutant Of Arabinofuranosidase From Thermobacillus Xylanilyticus In Complex With A Pentasaccharide |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX266019 | 215 | 242 | 456 | 0 |
| JG590935 | 225 | 233 | 453 | 0 |
| FP026468 | 225 | 233 | 453 | 0 |
| CV524286 | 224 | 233 | 452 | 0 |
| FP028313 | 225 | 233 | 453 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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