| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_37.144 |
| Family | GH35 |
| Protein Properties | Length: 834 Molecular Weight: 93692.1 Isoelectric Point: 8.7308 |
| Chromosome | Chromosome/Scaffold: 37 Start: 1157073 End: 1161680 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 41 | 345 | 0 |
| LIVNGKRELLYSGSIHYPRSTPDMWPSILAKARRGGLNVIQTYVFWNIHEPVQGQYNFTGNYDLVKFIKLVQEHGMFVTLRLGPFIQAEWNHGGLPFWLR EVPGIIFRSDNEPWKHHMEKYVKMVLDKCKAEKLFAPQGGPIILAQIENEYSAIQRAYRALGDSYVQWAAKMAQSMNIGVPWAMCKQNDAPDPMINACNG RHCGDTFPGPNSPNKPAIWTENWTAQFRVFGDPPSQRSAEDIAFSVARFFSKNGTLVNYYMYHGGTNFGRTGAHFVTTRYYDEAPLDEYGLLREPKYGHL KHLHR | |||
| Full Sequence |
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| Protein Sequence Length: 834 Download |
| MITFPCLRSV LLAAILSSFL VSCAVAHGKK EQAVTYDGRS LIVNGKRELL YSGSIHYPRS 60 TPDMWPSILA KARRGGLNVI QTYVFWNIHE PVQGQYNFTG NYDLVKFIKL VQEHGMFVTL 120 RLGPFIQAEW NHGGLPFWLR EVPGIIFRSD NEPWKHHMEK YVKMVLDKCK AEKLFAPQGG 180 PIILAQIENE YSAIQRAYRA LGDSYVQWAA KMAQSMNIGV PWAMCKQNDA PDPMINACNG 240 RHCGDTFPGP NSPNKPAIWT ENWTAQFRVF GDPPSQRSAE DIAFSVARFF SKNGTLVNYY 300 MYHGGTNFGR TGAHFVTTRY YDEAPLDEYG LLREPKYGHL KHLHRALNLC KKALLWGEPR 360 VERLEKDVEV RYYQQPGTKV CAAFLANNDT KQAKTVKFKG QEFLLPSRSI SILPDCKTVV 420 FNTATIVAQH NSRSYHESEK ANKNLNFEMY SENIPTRLSD VNVIPHELFG LTKDVSDYAW 480 YTTTIKLDPE DLPMKKDILP VLRVSSLGHA LAAFVNGEYV GNAHGSHEEK SFVFQKPIKL 540 HVGVNDITIL GMLTGFPDSG AYLEHRYAGP RGISILGLNT GTLDLTENFW GHRVGLEGEK 600 ASWFTEEGSQ KLNWKKAGGN APAFTWYKTY FDAPESDNPV VVRMDTMGKG MIWVNGNNIG 660 RFWTAFKSPL GQPSQSEYHV PRAYLKPKDN LLVILDEEPG VEPNKIQFLL VKRDTICSHI 720 SETYPPNVKS WTREKNKIRP VVDEVKLMAS LKCPSHKQIV AVEFTSFGNP FGSCGSFYNG 780 NCTAPGTKEI VEKYCLGKES CSIPFDRSIF LKNNDGCADS PKSLAIQVKC GGK* 840 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 9.0e-5 | 56 | 191 | 151 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 2.0e-17 | 751 | 830 | 83 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 1.0e-18 | 34 | 191 | 166 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-156 | 40 | 347 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 9 | 830 | 849 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD24606.1 | 0 | 37 | 831 | 31 | 827 | putative beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_179264.2 | 0 | 34 | 831 | 44 | 843 | BGAL13; beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_567973.1 | 0 | 32 | 831 | 39 | 840 | BGAL11 (beta-galactosidase 11); beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | XP_002306183.1 | 0 | 24 | 833 | 21 | 829 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002312963.1 | 0 | 10 | 833 | 7 | 828 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 8.00001e-41 | 40 | 343 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.0002 | 620 | 696 | 506 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 8e-40 | 34 | 343 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 8e-40 | 34 | 343 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778160 | 748 | 9 | 730 | 0 |
| CO128575 | 295 | 63 | 357 | 0 |
| HO780602 | 590 | 84 | 666 | 0 |
| CO121155 | 290 | 89 | 378 | 0 |
| CO112063 | 271 | 89 | 359 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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