Basic Information | |
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Species | Carica papaya |
Cazyme ID | evm.model.supercontig_37.165 |
Family | GH10 |
Protein Properties | Length: 550 Molecular Weight: 62084.6 Isoelectric Point: 5.825 |
Chromosome | Chromosome/Scaffold: 37 Start: 1339235 End: 1341988 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH10 | 205 | 468 | 0 |
SKDFPFGSAIAKTILGNLPYQNWFVKRFDATVFENELKWYATEPKQGKTNYAIADQMMEFVRANGIIARGHNIFWEDPKYNPSWVLNLTGPELQSAVNSR IQSLMSKYKEEFIHWDVSNEMLHFNFYEQRLGPNATLQFYQTASQADPLATLFMNEFNVVETCGDEKSTVDTYIARVRELEGGGVSMNGIGLEGHFTVPN PPLMKAIIDKLATLKLPIWLTEVDISSKLDMETQGAYLEQVLQEGFSHPAIEGIMLWTALHPNG |
Full Sequence |
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Protein Sequence Length: 550 Download |
MKHFLLLLLV GGFLVLVTAS YDGPLYDFTA YTECKLKPEN PLYDGGILKD YPSVVQYKRS 60 VDTFYTPAFV LHNLTQGSIY CFSTWVKIEG RAGSAHIRGS LKTDNKTYNC IGTVLAKSGC 120 WSFLKGGFVV DSPSTLALLF FQNLNDTDLN IAVASSSLQP FTEEQWKINQ QYIINTARKR 180 AVTIHLSDRN GDRLQGAEIT VEQISKDFPF GSAIAKTILG NLPYQNWFVK RFDATVFENE 240 LKWYATEPKQ GKTNYAIADQ MMEFVRANGI IARGHNIFWE DPKYNPSWVL NLTGPELQSA 300 VNSRIQSLMS KYKEEFIHWD VSNEMLHFNF YEQRLGPNAT LQFYQTASQA DPLATLFMNE 360 FNVVETCGDE KSTVDTYIAR VRELEGGGVS MNGIGLEGHF TVPNPPLMKA IIDKLATLKL 420 PIWLTEVDIS SKLDMETQGA YLEQVLQEGF SHPAIEGIML WTALHPNGCY QMCLTDQNFR 480 NLPAGDVVDK LLQEWRTGEL KGETDEYGSY NMYGFLGEYR LSVVYGNRTA TSTFSLCKSR 540 ETKHIRVQL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 4.0e-36 | 203 | 445 | 258 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 1.0e-55 | 202 | 461 | 276 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 2.0e-73 | 241 | 488 | 269 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF94921.1 | 0 | 1 | 549 | 9 | 558 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
EMBL | CBI37893.1 | 0 | 3 | 549 | 81 | 625 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195577.2 | 0 | 22 | 549 | 30 | 562 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
RefSeq | XP_002277675.1 | 0 | 17 | 549 | 19 | 549 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002534153.1 | 0 | 81 | 549 | 6 | 473 | Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v6y_A | 2e-27 | 210 | 461 | 16 | 275 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 1tux_A | 8e-27 | 238 | 492 | 46 | 301 | A Chain A, High Resolution Crystal Structure Of A Thermostable Xylanase From Thermoascus Aurantiacus |
PDB | 1nq6_A | 6e-26 | 210 | 461 | 15 | 268 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 2g4f_B | 2e-25 | 210 | 429 | 16 | 239 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
PDB | 2g4f_A | 2e-25 | 210 | 429 | 16 | 239 | A Chain A, Crystal Structure Of The Catalytic Domain Of Xylanase A From Streptomyces Halstedii Jm8 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.8-RXN | EC-3.2.1.8 | endo-1,4-β-xylanase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES803339 | 253 | 195 | 447 | 0 |
GR953916 | 292 | 184 | 475 | 0 |
DY024035 | 264 | 264 | 524 | 0 |
CX705541 | 238 | 313 | 550 | 0 |
DV530577 | 250 | 224 | 473 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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