| Basic Information | |
|---|---|
| Species | Carica papaya |
| Cazyme ID | evm.model.supercontig_37.29 |
| Family | GH35 |
| Protein Properties | Length: 714 Molecular Weight: 80538 Isoelectric Point: 6.1437 |
| Chromosome | Chromosome/Scaffold: 37 Start: 195334 End: 200426 |
| Description | Glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 31 | 335 | 0 |
| LMVDGHRQIFFSASIHYPRSTPDMWPSLISKAKEGGVDVIETYVFWNLHEPQPLQYDFSGRNDLVRFIKEIQAQGLYAFLRIGPFIESEWTYGGLPFWLH DVPGVVYRTDNEPFKFYMQNFTTKIVNLMKSEKLYASRGGPIILSQIENEYGNVEPAFHEKGPVYVRWAAKMAVDLQTGVPWVMCKQPDAPDPVINTCNG MRCGETFPGPNSPNKPKIWTENWTSFYQVYGGEPYMRSAEDIAFHVALFIAKNGSFVNYYMYHGGTNFGRSGAAYVITSYYDQAPLDEYGLIRQPKWGHM KELHA | |||
| Full Sequence |
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| Protein Sequence Length: 714 Download |
| MGIMWVMILW VFGAAVGIGR GGDVTYDGRS LMVDGHRQIF FSASIHYPRS TPDMWPSLIS 60 KAKEGGVDVI ETYVFWNLHE PQPLQYDFSG RNDLVRFIKE IQAQGLYAFL RIGPFIESEW 120 TYGGLPFWLH DVPGVVYRTD NEPFKFYMQN FTTKIVNLMK SEKLYASRGG PIILSQIENE 180 YGNVEPAFHE KGPVYVRWAA KMAVDLQTGV PWVMCKQPDA PDPVINTCNG MRCGETFPGP 240 NSPNKPKIWT ENWTSFYQVY GGEPYMRSAE DIAFHVALFI AKNGSFVNYY MYHGGTNFGR 300 SGAAYVITSY YDQAPLDEYG LIRQPKWGHM KELHAAIKLC STPLLQGVPT NFSLGKLQEA 360 YVFEEPSGAC VAFLVNYDPT RTFTTKFRDT WFKLLPRSIS ILSDCRNLIF NTAKVSTEKK 420 NTRITTPEIN FEAEDKWEAY RDLVLNYLNS SLRANKLLEH MNTTKDKSDY LWYTFSFQSN 480 TSCSNAQLHV QSLGHVGHAF VNDNYAGGGH GSHTSKGFTI DNSITLNNRI NNISILSVMV 540 GLPDSGSFLE RRYAGLTEVR IQCSDETTAY DFENYEWGYE VGLQGEKLGI YEEENLGNVN 600 WSSNITLFND QSLTWYKTAF DAPMGENPVA LNLSSMGKGE AWVNGQSIGR YWVSFHTPKG 660 LPSQTLYHIP RSFLNVSNNL LVLFEESGGD PLQITLNTIS VIDSTGHVSL YKS* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 9.0e-6 | 46 | 189 | 158 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 1.0e-18 | 24 | 201 | 189 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-147 | 30 | 337 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 24 | 696 | 702 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF01618.1 | 0 | 2 | 705 | 9 | 711 | beta-galactosidase like protein [Arabidopsis thaliana] |
| EMBL | CAN82672.1 | 0 | 19 | 711 | 21 | 683 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI21611.1 | 0 | 19 | 708 | 21 | 714 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002274012.1 | 0 | 19 | 708 | 57 | 743 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002307056.1 | 0 | 3 | 711 | 5 | 711 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1e-37 | 30 | 333 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.01 | 631 | 688 | 525 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 5e-28 | 20 | 357 | 7 | 354 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 5e-28 | 20 | 357 | 7 | 354 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO778160 | 710 | 24 | 701 | 0 |
| HO780602 | 591 | 74 | 655 | 0 |
| DY961675 | 287 | 22 | 307 | 0 |
| HO795552 | 531 | 114 | 635 | 0 |
| HO795552 | 74 | 2 | 75 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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